KEGG   Carica papaya (papaya): 110815537
Entry
110815537         CDS       T05151                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110815537
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    110815537
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 Prok-RING_4 DEAD zf-RING_5 zf-C3HC4_4 ResIII RING_XB3-XBAT31 zf-RING_4 zf-ANAPC11 TMEM145_N zf-RING_11
Other DBs
NCBI-GeneID: 110815537
NCBI-ProteinID: XP_021899056
LinkDB
Position
Unknown
AA seq 1036 aa
MGTKVSDELVSTVRSVVGSDYSDMDIIRALHLAKHDATAAINIIFDTPNFKSVEITSRNL
SSSARPADTRRKRIEQENKTSTISDDQTVTCSVSNVEDTLTANVDKDSGLHSISEDWWFV
GSSEVAGLSTCKGRKIKAGDEVVFTFPLRSGLSSGSTPRKGFGRGREAAAACSEIMRFAT
KNSGEIGRMPNEWARCLLPLVRDKKVRIEGHCTSAPDMLGIMDTILLSTSVSINSSMFRK
HKQTSLKAASSSTEESVFHPLPNLFRLLGLTPFKKAEFTPADLYTRKRPLDSEDGSALPA
SLFPASKFKNQSQNGNEVENEECISDADLDNIVGLRDSSELEEMDSPSSLQCELRPYQKQ
ALNWMIQLEKRQGMDEAATTLHPCWDAYRLADKRGLVVYLNSFSGDAATEFPSTLQMARG
GMLADAMGLGKTIMTIALLLAHSDKGGLPSNQCMTQPSCESCEVSGLSGESPNLPKKATN
FSGFDNFVKQKKTLKNGVNLIICPMTLLGQWKAEIETHVHPGSLSLYIHYGQSRLKDAKI
LAQSDVVITTYGVLASEFSGENAEDNGGLFSVHWFRVVLDEAHTIKSSKSLISMAAAALV
ADRRWCLTGTPIQNKLEDIYSLLRFLRVEPWGSWAWWNKLVQKPFEEGDGRGLKLVQSIL
KPIMLRRTKFSTDREGRPILVLPPADMQVIYCELTDTERDFYEALFKRSKVKFDQFVEQG
RVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKMAKRFLKGNHNALEGEAGDV
PSRAYVQEVLEELRKGDQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNLTSGLCPVC
RKAISRQDLITAPTSSRFQIDVEKNWVESSKITLLLQELEHLRPSGSKTILFSQWTAFLD
LLEIPLSRSSIPFVRLDGTLNQQQRERVIKQFSEDTNILVFLMSLKAGGVGINLTAASNA
FVLDPWWNPAVEVQAVMRIHRIGQMKRVTIKRFIVKGTVEERMEAVQARKQQMIAGALTD
QEVRTARIEELKMLFT
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgggaaccaaggtctcggacgaactcgtatctacagttaggtcagtggtgggttcggac
tattccgacatggacataataagagccctgcatctggcaaaacacgatgccaccgccgct
ataaatatcattttcgacactcctaatttcaagagtgtcgagataacctctcgcaacttg
agctccagcgcaagacccgctgatacgagacggaagagaatcgaacaagagaataagact
agcactatcagtgatgaccagacggttacttgtagcgttagtaacgtggaggatactctc
actgctaatgttgataaggattcaggattgcattcgatctcggaggattggtggtttgtg
ggttctagcgaagtggcgggactgtcaacgtgtaaagggagaaaaattaaggctggtgat
gaagttgttttcacgtttccattgaggagtggtttgagttcggggtcgacaccacggaaa
ggttttgggaggggaagggaagctgcagctgcttgctcagagattatgagatttgccacc
aaaaattctggagagattggtagaatgccaaacgagtgggctcggtgtctattgccactt
gtgagggataagaaggtcagaatcgagggccactgtacatctgctcctgatatgttgggt
attatggacactattcttctttcgacaagcgtgtccataaacagttcaatgttccggaag
cacaagcagacctcacttaaggcagccagcagttccactgaagaatctgtttttcatcct
ctcccaaatttatttcgattgcttggattgaccccattcaagaaggccgaatttactcct
gctgatctgtacacaaggaagagacctttggattcagaggatggctctgctcttcccgct
tcgttgtttcctgccagcaagtttaaaaatcagtctcagaatggaaacgaagttgaaaat
gaggagtgcatttcagatgccgatcttgacaatattgttggacttagggacagctctgag
ctagaggaaatggattcccctagtagtcttcagtgtgaacttcgtccttatcaaaagcag
gcacttaattggatgatccaactcgagaagagacagggcatggatgaggcagcaacaacc
cttcatccttgttgggatgcatatcgcttagcagacaagaggggacttgttgtttatttg
aattcattttctggtgatgctgcaactgaatttcctagcacacttcaaatggccagagga
ggaatgttagcagatgctatgggtcttgggaagaccataatgaccatagcccttcttctt
gctcattctgataaaggtggcttgcctagtaatcaatgcatgactcagccttcttgtgaa
agctgtgaagttagtggcctttcgggtgaatcacctaatcttccaaagaaggcaacaaac
ttttcgggctttgataatttcgtaaagcaaaagaagacactgaaaaatggtgtcaacctc
atcatatgtcctatgactcttcttggccagtggaaggcagagattgaaactcatgtgcat
ccagggtcgctctctctctacattcactatggacaaagcagactgaaggatgcaaaaatc
ctagcccagagtgatgttgtaattactacatacggagtcttagcttcagagttttcagga
gagaatgctgaagacaatggggggcttttctcagttcactggtttagagtggttcttgat
gaggcacataccataaaatcatccaagagcctgatttccatggcagctgcagctctagtt
gctgatcgccgctggtgtcttactggtactcctatccagaacaagctggaggatatttac
agtcttcttcgattcctgagggtggaaccttggggaagttgggcatggtggaataagctt
gtccaaaagccgtttgaggagggggatggaagagggctaaagttggtccagtctatctta
aaaccgataatgttaaggagaacaaagtttagcacagatcgagaagggagaccaattcta
gttctccccccagctgatatgcaggtgatttactgtgaattaacagacactgaaagggat
ttctatgaggccttgttcaaaagatctaaggttaaatttgatcaattcgttgagcaagga
cgggttcttcataattacgcctccattttggagctacttttgcgtcttcggcagtgttgt
gatcacccatttcttgtgatgagtcgaggagatacgcaagaatattctgatctgaataag
atggctaaacgattcctgaagggcaaccataatgctctggaaggggaagctggagatgta
ccttcaagggcttatgtccaagaggtgttggaggagctaagaaagggtgaccaaggagag
tgccccatatgtcttgaagcattcgaagatgctgtattgacaccatgtgctcatcggtta
tgccgtgagtgtctcttagcaagttggcgaaatctgacttctggtttatgccctgtttgt
aggaaagcgattagcagacaggatcttatcacggctcccactagtagtaggttccagatt
gacgttgagaaaaattgggttgaatcatcaaaaattactcttttgttgcaagaacttgaa
caccttcgcccctcaggttctaagaccattctgttcagccagtggactgcctttcttgac
ctgttggagattcctctttctcggagtagcattccatttgtgcgtttggatgggacttta
aatcagcagcagcgtgagagagtaatcaaacagttctcagaagataccaacatcttggtg
ttcctgatgtcactgaaagctggtggtgttggaataaatcttactgcagcatcaaatgcg
tttgtcttggacccgtggtggaatccagctgtagaggtacaagctgttatgcgtatccat
cgcattggacaaatgaaaagggtaacgatcaaacggttcattgtaaagggaacagttgag
gaaagaatggaggcagtgcaagcacgtaagcagcagatgattgctggtgccttaactgat
caagaagttcggacagcacgaattgaggagctgaaaatgctctttacatga

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