Carica papaya (papaya): 110815890
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Entry
110815890 CDS
T05151
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110815890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110815890
Spliceosome [BR:
cpap03041
]
Complex C
Other components
Step II factors
110815890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
110815890
NCBI-ProteinID:
XP_021899553
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIFQADKFRKGACENCGAMTHDSKSCMERPRKKGAKW
TNMNIAPDEKIETFELDYDGKRDRWNGYDAATYARVIERYEARDEARRKYVKEQQLKKLE
EKNSKHNGEDEVSDEEDDDDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPHEKFYEGDNQYRMSGQALEFKQLNI
HAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSRVKDTIMEKYGNAATEEEMPREL
LLGQSERLVEYDRAGRVIKGLETSLPKSKYEEDVYINNHTTVWGSWWKDHQWGYKCCKQT
IRNSYCTGVAGIEAAEAATDLMKANVARKAASEEAPAPVEEKRLATWGTEVPDDLVLDQK
KLAEALKKEDEKRREEKDERKRKYNVRWNDEVTAEEMEAYRMKKIHHDDPMKDFLN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagtggcattcaagtcgcgggaggatcataggaagcagttagagtta
gaggaggcacgtaaagcagggcttgctccagctgaagtagatgaggatggaaaggaaatt
aacccccatattcctcagtatatgtcatctgcgccatggtaccttaatgctgagagacct
agcttaaaacatcaaaggaaatggaaatctgatccaaattacacaaagtcatggtacgat
agaggtgctaaaatatttcaagcagataagttccggaagggagcatgtgaaaactgtgga
gcaatgacacatgattcaaagtcttgcatggagaggcctagaaagaaaggtgcaaaatgg
acgaacatgaatattgctcctgatgaaaaaatagagacttttgaactagattatgatggt
aaaagagatcgatggaatggttatgatgctgcaacatatgctcgcgtcatagagagatat
gaggcacgggatgaagctagaaggaaatacgtaaaagaacaacaactgaaaaaattggag
gagaagaatagtaagcacaatggggaggatgaggttagtgatgaagaagatgatgatgat
gctctgaaggttgatgaagctaaggttgatgagagcaagcagatggacttcgcaaaggtt
gagaagcgtgtccgcactacaggtggtggaagcactggaactgtcaggaatttgcgtatt
cgagaggacacagcaaaatatcttctgaatcttgatgtcaattctgcttattatgatcca
aagacgcggtctatgcgtgaagatcctctgcctgatgctgatcctcacgagaaattctat
gaaggagataatcaatatagaatgagtgggcaagcattggagttcaagcaactcaatatt
catgcatgggaggcatttgacaagggccaagacatccacatgcaggctgccccatctcaa
gctgaattattgttcaagaattataaggtgattaaggagaagttaaagtcgcgggtgaaa
gacacaatcatggagaagtatggtaatgcagcaactgaagaagagatgccaagggagctt
ctactagggcaaagcgagaggctggtggagtatgatcgagctggaagagttataaaaggc
ctggaaacatctctaccgaaaagcaagtatgaagaagatgtttacatcaataaccacact
accgtttggggttcgtggtggaaggatcaccagtggggctacaaatgttgtaagcaaaca
attcggaatagttactgcactggtgttgcaggaatagaagcggctgaagcagcaacagac
ctaatgaaggccaatgttgcacgcaaggcagcttctgaagaggcacctgctcccgtggag
gagaaaaggcttgctacctggggaactgaggtgccggatgacttggttcttgaccagaaa
aaacttgcggaggcacttaagaaggaagatgagaaaaggagagaagagaaggatgaaagg
aagcgcaaatataatgttaggtggaatgatgaggttactgctgaggagatggaggcttat
aggatgaaaaagatacatcacgatgaccccatgaaggactttctgaactaa
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