Carica papaya (papaya): 110816012
Help
Entry
110816012 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap00040
Pentose and glucuronate interconversions
cpap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110816012
Enzymes [BR:
cpap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110816012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110816012
NCBI-ProteinID:
XP_021899715
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MSIILLFYTLFFSLFFPHLVFSTSPLQDPELVLQELQRSINVSRTNLRYFSCGTGNPIDD
CWRCDPNWERNRQRLADCAIGFGKNAIGGRNGRXYVVTDSGDDDPVNPKPGTLRHAVIQD
EPLWIIFQRDMVIKLKNELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGIHVHDC
KQAGNANIRDSPHHSGWWTISDGDGISIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRXLIHHFIHACIHVIM
YVFICVLDLLFIYVGLMCRXXXXXXXXXXXXXGGSADPTIYSQGNRFLAPDVRFRKEVTK
HEDAPESEWRHWNWKSEGDMFLNGAYFRQSGGGASSSYARASSLSARPSSLVGAMTTTAG
ALNCRKGSRC
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcattttactcttttatactctcttcttctcccttttcttcccacatctcgtc
ttctccacctctccactccaagaccctgaacttgtacttcaagaacttcaaagaagtata
aatgtgtctcggacaaacttgaggtacttctcgtgtggaacgggtaatccgattgatgat
tgctggcgttgtgacccgaactgggagaggaaccggcagaggttagctgactgtgctatt
gggttcggtaagaacgccattggaggaagaaatggtcggnattacgtcgttacggattcc
ggagacgatgaccctgtgaatccaaagccgggaacgctccgacatgccgtgatccaagac
gagccgctctggatcatttttcaacgagacatggtcatcaagctcaagaacgaactcgtc
atgaattcgttcaaaaccattgatggcaggggagcgagtgttcacattgcagggggtcca
tgcatcaccatccattacgcaaccaacatcatcatccatggcatccacgtccatgactgc
aagcaggcggggaatgctaacatacgggactccccacatcactccggatggtggaccata
tcggacggtgatggtatctccatctttggaggaagacacatctgggttgatcactgttca
ctctcaaactgccatgatggactcattgatgccatccatggctccaccgccatcaccatc
tccaacaactacatgacccatcatgacaaggtcatgcttttgggtcatagtgattcctac
acacaggacaagaacatgcaggttactattgcctttaaccattttggagaaggtctggtt
caaagaatgccgaggtaattaattcatcattttatacatgcatgcatccatgtcattatg
tacgtatttatatgtgtattggatttgttgtttatatatgtgggattaatgtgcaggtgn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtggaagtgctgatcctaccatt
tacagtcaaggcaacagatttcttgcacccgatgttagatttagaaaagaggtgacaaag
cacgaggatgcaccggagagtgagtggagacattggaactggaagtcggaaggcgacatg
tttctgaacggtgcatacttcaggcaatccggcggaggagcttcgtcaagctacgctaga
gcctccagcctcagtgcccgaccgtcgtcgcttgtgggcgccatgaccaccacagccggc
gcactcaactgtaggaaaggctcccgttgctga
DBGET
integrated database retrieval system
