KEGG   Carica papaya (papaya): 110816226
Entry
110816226         CDS       T05151                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03082  ATP-dependent chromatin remodeling
cpap03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110816226
   03083 Polycomb repressive complex
    110816226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpap03036]
    110816226
Chromosome and associated proteins [BR:cpap03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     110816226
  Histone modification proteins
   HAT complexes
    HATB complex
     110816226
   HDAC complexes
    Sin3A-HDAC complex
     110816226
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     110816226
    PRC2.2
     110816226
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     110816226
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110816226
  Chromatin remodeling factors
   NuRD complex
    110816226
   NuRF complex
    110816226
   NuRF complex (fruit fly)
    110816226
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR19_1st WD_LRWD1 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 110816226
NCBI-ProteinID: XP_021900030
LinkDB
Position
Unknown
AA seq 393 aa
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDSENDARHYDDDRSDVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACTPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDMRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWVLATGSTDKTVKL
FDLRKINAALHTFDSHKIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIAS
VAEDNILQIWQMAENIYHDEDDIPGDESTKGPQ
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggggaaagacgaagaggagatgaggggagagatagaggagaggctgatcaacgaagag
tacaagatttggaagaagaatactcctttcctttatgatctggttatcactcatgccctc
gagtggccttcacttaccgtcgagtggttaccagacagagaggagcctcccggaaaggat
tactctgtccagaagatgatactgggaactcacacctcagagaacgagcccaattacctc
atgctcgcccaggtccagcttccactcgaggattctgagaatgatgctcgccattatgac
gacgatcgctccgacgtcggcggctttggctgcgcaaacggcaaggtacaaattattcag
cagataaatcatgatggtgaggtcaacagggctcgttacatgccgcaaaacccatttatt
attgccaccaagactgtcagtgcagaagtctatgttttcgattatagcaagcacccatct
aagcctcctctagatggtgcatgcactcctgacttgaggttgaggggccacagcactgaa
ggatatggtttatcttggagtaagttcaagcagggtcatttgcttagtggatctgatgat
gctcagatttgcttgtgggacatcaatgcaactcccaaaaataaggctcttgatgctatg
caaatttttaaggttcatgaaggtgttgtggaagatgtagcatggcatctgaggcatgaa
tatttatttggttctgttggagatgatcagtacctacttatatgggatatgcgcacccca
tcagtcagtaaacctgtgcaatctgtggttgcgcaccagagcgaggtcaactgcttagct
ttcaatccatttaatgaatgggttcttgcaacgggttctactgataagactgttaaatta
tttgatctacgaaagatcaatgctgcactccacacctttgatagtcacaagattgatgaa
gaacagacacccgaagatgctgaagatgggcctccagaattgctttttatccatggtggt
cacacaagtaaaatctcagatttttcgtggaacccatgtgaagattgggtaattgccagt
gttgctgaagataacattctccaaatatggcagatggctgagaacatttaccatgatgaa
gatgatatacctggagatgaatcaacaaaaggtccacagtaa

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