Carica papaya (papaya): 110816318
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Entry
110816318 CDS
T05151
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04120
Ubiquitin mediated proteolysis
cpap04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110816318
04120 Ubiquitin mediated proteolysis
110816318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110816318
Enzymes [BR:
cpap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110816318
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110816318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
110816318
NCBI-ProteinID:
XP_021900157
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MMRLRTYASLSLFATIAVVYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL
TKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPILSHARIVSFMAFLLLLDSLFLYSSVKYLIQTRQASVSLFFSFEYM
ILATTTVSIFIKYVFYVSDMLMEGQWETKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYVRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSAGGQNVARQDAHQQGMSPP
NTDAQGSAAGVLNDNLSGHQARLQAAAAAASVYERSYAYPSASTLIWSPGYALFLQASRP
ESDIGSSVEQTSVGSREYVVPGGSSNLSFPLFPHSVFVPFQLDGASVNSGNRLGVDINIP
DSQLEMQRKFLQHQIEILQDQLQLLQMPKAEESMATDHPVSSASVGKSVGSSSASVSDSG
RREGIEGGY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggttgcgtacatatgccagtcttagtctctttgcgactatagcggttgtttat
catgcttttaacagtagaggccaattttaccctgcaatggtttatttatcgacgtctaag
atcagcttggtgcttcttctcaacatgggtttggtcattatgtgcactctgtggcaatta
accaaaagggtctttctgggttcccttcgagaagcggaggtggagaggttgaatgagcaa
tcatggagggaggtcatggaaatcctctttgcaataactattttcagacaggacttctca
gttacatttcttgctatggtcacagctctattgttaatcaaggctttgcattggttggct
cagaaaagagttgaatacatcgaaacaaccccctctgttcccatattgtctcacgctcgg
atagtttcttttatggctttcctcctcctcctagattctctgtttttatacagttctgtc
aagtatttgattcaaacacgtcaggcttcagtatctctctttttctcatttgagtacatg
atactagcaacaacaacagtgtcaatatttataaaatatgttttctatgtgagtgacatg
ctcatggaaggacaatgggaaacaaaggctgtgtacaccttctacttggagcttattcgt
gacttgctgcacttgtcaatgtatctatgcttctttctggtgatcttcatgaattatggc
gttcctttgcacctaatacgggagctctatgaaacatttaggaacttcaaaatacgtgtt
gctgattacgttcgttatcggaaaatcacttcaaatatgaatgatcgatttccagatgca
acccctgaagagcttaatgcaagtgatgcaacctgcattatatgtcgtgaagagatgaca
acagccaagaaattaatctgtgggcatcttttccatgtgcattgcctacggtcatggtta
gagcgacagcacacatgtccaacatgcagagcattggttgtaccacctgaaaatgggaca
tcggctggaggacaaaatgtggcacggcaagatgctcatcagcagggaatgagcccccca
aatacagatgctcagggttctgctgctggagttctcaatgataatttgagtggtcatcag
gccaggcttcaagctgctgctgctgctgcctctgtatatgaaagatcctatgcatatcct
tctgcaagcacgctaatatggtctcctggttatgctttatttcttcaggcatctagacct
gaatctgatattgggagtagcgtggaacaaacttctgttggctctagagaatacgtagtt
cctggtggatcttcaaacttatcctttccactatttccgcactctgtttttgtgcctttc
cagttagatggtgcgagtgtgaattctgggaacagattgggtgttgatataaatattcca
gattctcagttggaaatgcagaggaagttcctccaacatcagattgagatccttcaagac
cagctccaactcctgcagatgcccaaagctgaggaaagcatggcaactgaccacccagta
tcatcagctagtgtaggcaagagtgttggatcttcatctgcttctgtttctgacagtggt
cgtcgtgaggggattgaaggagggtactga
DBGET
integrated database retrieval system
