Carica papaya (papaya): 110816451
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Entry
110816451 CDS
T05151
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03082
ATP-dependent chromatin remodeling
cpap03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110816451
03083 Polycomb repressive complex
110816451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpap03036
]
110816451
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110816451
Histone modification proteins
HAT complexes
HATB complex
110816451
HDAC complexes
Sin3A-HDAC complex
110816451
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110816451
PRC2.2
110816451
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110816451
Heterochromatin formation proteins
Other heterochromatin formation proteins
110816451
Chromatin remodeling factors
NuRD complex
110816451
NuRF complex
110816451
NuRF complex (fruit fly)
110816451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_SPT8
ANAPC4_WD40
eIF2A
MIOS_WD40
Beta-prop_RIG_1st
WDR90_beta-prop_4th
WD40_like
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
110816451
NCBI-ProteinID:
XP_021900342
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MAEDGYEPSADQVEEEFAVWKKNTPFLYDLVISHPLEWPSLTVHWVPSPPQPYAVDSSFS
VHKLVLGTHTSGGASDFLMVADALIPTQEAEPNIGGKSEDQIVPKVEIKQKIRVDGEVNR
ARCMPQNPALIGAKTSGCEVLVFDYVKQATKQPGGECDPDLRLRGHDKEGYGLSWSPFKE
GYLLSGSQDHKICLWDVSAVAQNKILDALHVYQAHETVVEDVTWHMKNENIFGSAGDDCQ
VMIWDLRTNQIEHRVKVHEREVNYISFNPYNEWVLATASSDSTVGLFDIRKLAVPLHVLT
SHEGEVFQVEWDPNHETVLASSGDDRRLMVWDLNRIGEEQLEMELDAEDGPPELLFSHGG
HKAKISDFAWNKNEPWVISSVAEDNSLQVWQMAESIYRDDDDDVQAEDD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacgggtatgaaccgagcgcggatcaggtggaggaggaattcgcggtttgg
aagaagaacacacctttcctatacgatctggtgatatctcaccctctcgagtggccatcg
cttactgtccactgggtcccttcgcctccgcagccgtacgctgtcgactcatctttctct
gtccacaagctcgtgctcggaacccacacatccggcggagcttcagatttcctcatggtc
gctgacgctcttatccctacccaggaagctgaacccaacatcggcggcaaaagcgaggat
caaattgtccccaaggtagagataaaacaaaagatacgtgttgatggggaagtgaataga
gcgaggtgtatgccacagaatccagctcttattggtgccaagacaagtggttgcgaagtg
ttagtgtttgattacgtgaagcaggcaacgaaacaaccgggaggtgaatgtgatcctgat
ttgaggttgaggggtcatgataaggaaggatatgggttgtcctggagtccctttaaggag
ggttatcttctgagtggttcacaagatcataagatatgcctctgggatgtgtctgctgta
gctcagaataagattctcgatgcacttcatgtttatcaggcccatgaaactgtagttgaa
gatgtaacatggcatatgaaaaatgaaaacatatttggatcagcaggtgatgattgtcaa
gtgatgatttgggacttgcgaacaaatcaaatagaacaccgtgtcaaagttcatgagaga
gaggttaactatatatctttcaatccttataacgaatgggttctagccacagcatcttca
gactctactgttggcctgtttgatattcggaagttggctgtgccactgcatgttttgact
agtcatgaaggagaggtgttccaggtggagtgggatcctaatcatgaaactgttctagca
tcatctggtgatgatcgtaggttgatggtctgggatcttaacaggattggggaagagcag
ctggagatggagctagatgccgaagatggccctccggagcttctattctctcatggaggt
cacaaggctaagatatccgacttcgcatggaacaaaaatgagccatgggtgatctcaagc
gtggccgaagataatagtcttcaggtgtggcagatggccgagagcatctaccgagatgac
gatgatgatgtgcaagctgaggatgactaa
DBGET
integrated database retrieval system
