Carica papaya (papaya): 110816486
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Entry
110816486 CDS
T05151
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110816486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110816486
Spliceosome [BR:
cpap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110816486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
110816486
NCBI-ProteinID:
XP_021900393
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATLADSFLADLDELSDNEDDHFEEDADAENMDEDIDAGMADIEALNYDDLDNVSKLQKT
QRYIDIIQKVEDALKKGTDTSYQGTILENDPEYQLIVDCNALSVDIENEIVIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
PDDVLQKTAEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLS
ALAKIPACNVQLLGNKKRNLAGFSTATSQFRVGYLEQTEIFQSTPPALRMRACRLLAAKS
TLAARVDSTRGDPSGSTGRALREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSNKLRVSRVQSKLSAK
VAKKFKEKAFGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSEIGTFSK
IKRT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattcctttcttgctgatcttgatgagttatcagacaatgaagat
gatcattttgaggaagatgctgatgctgagaacatggatgaagatattgatgccggtatg
gcagatattgaagctcttaattatgatgatctggataatgtttccaaactgcaaaagacg
cagagatacattgatataattcagaaagtggaagatgctcttaagaagggcactgataca
tcatatcaggggacaatactggagaatgatcctgaatatcagctgattgtggattgcaat
gccttatctgttgatattgagaatgaaattgttattatccacaattttattcgtgacaag
taccggctgaaatttcctgagcttgaatcacttgtacatcacccaatagattatgctcgt
gtggtgaaaaagatcggaaatgagatggatttaacacttgttgatctagaagggctcttg
ccatcggctatcattatggttgtttcagttacagcatcaactacaagtggaaagccactt
cctgatgatgtccttcagaagaccgctgaggcatgtgatcgagctcttgatcttgattca
gcaaagaaaaaggtccttgattttgtggaaagtagaatggggtatattgcaccaaatctt
tctgctattgttggaagtgcagtagcagccaaacttatgggcacggcgggtggtctctca
gcattggccaagatccctgcttgtaatgttcaacttcttggtaataagaaaaggaacctt
gcaggattttccacagcaacatcacaattccgtgttggttatctggagcagacagaaatt
ttccagagtacacctccggcactgaggatgcgtgcttgccgtctccttgccgcaaaatcg
accttggcagcacgagtggattctaccagaggagatccatcagggagcacgggaagagcc
ttacgggaagagattcgtaaaaaaattgagaagtggcaagaaccacctcctgcaaagcaa
cctaaaccacttccagttcctgattctgagcctaagaaaaagagaggtggtcgtcggtta
aggaagatgaaggaaaggtatgcaataacagacatgaggaagctggctaataggatgcaa
tttggtgtacctgaagagagttcgttgggtgatggtttgggcgagggttatggaatgctt
ggccaagctgggagtaacaaactacgggtatcccgtgttcagagcaaactttctgctaaa
gttgctaagaagtttaaggaaaaggcttttggaagcagtggtgctacatctggactgact
tcaagtctggcgtttacacctgtgcaggggattgagctgacaaacccacaagctcatgct
caccagcttggaagtggaactcaaagtacatatttctcagagattggaacattttcaaag
attaagagaacctga
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