Carica papaya (papaya): 110816745
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Entry
110816745 CDS
T05151
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110816745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110816745
03041 Spliceosome [BR:
cpap03041
]
110816745
03032 DNA replication proteins [BR:
cpap03032
]
110816745
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
110816745
Spliceosome [BR:
cpap03041
]
Complex A
U1 snRNP components
Sm proteins
110816745
U2 snRNP components
110816745
Complex B
U1 snRNP components
110816745
U4/U6.U5 tri-snRNP components
110816745
Complex C
U2 snRNP components
110816745
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110816745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
110816745
NCBI-ProteinID:
XP_021900756
LinkDB
All DBs
Position
Unknown
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSSSIGVGRGRAVAMRAKAQAAGRGA
TAGRGVVPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagcttggggataccagtgaagctgctacacgaggcctcagggcacgtggta
actgtggagctgaagagtggagagctctacagaggcagcatggtggagtgtgaggacaac
tggaactgccagctcgagagcatcacctatactgctaaggacgggaaagtctcacaactt
gagcatgtttttattcgtgggagtaaagtcaggtttatggtcataccagacatgctgaag
aatgctcccatgttcaaacgtctagatgctagaatcaagggtaagagctcttcaattgga
gtaggcagaggtcgggcagttgcaatgcgagccaaagctcaagctgctggccgaggggca
acagctggaaggggcgttgtaccacctgtgcggaggtga
DBGET
integrated database retrieval system
