Carica papaya (papaya): 110816871
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Entry
110816871 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110816871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpap03036
]
110816871
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
110816871
SWR1 complex
110816871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
ATP_transf
Motif
Other DBs
NCBI-GeneID:
110816871
NCBI-ProteinID:
XP_021900909
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MIWFPLQDDETTLSEEEKLAEADSNSPLDEIALLQKESEIPVEELIARYKKDFNVAEISE
DESEYASAFSEDPLDSSTQEDIEIKQQDNSLNENFGHESVPTLSPVREQEAGSDEKLEGS
GSDNRLADAAAAARSAQPTGYTFSTTKVRTKLPFLLKYSLREYQHIGLDWLVTMYEKRLN
GILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTY
FGSAKERKLKRQGWLKVNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQR
WQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPIAGMVEGQ
EKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPKKHEHVICCRLSKRQRNLYEDFIASSET
QATLASANFFGMIGIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDIQLSSSVCSILSSSLF
STIDLKGLGLLFTHNDFSMTSWESDELKAIATPSSLIRERVSADNLEEIAPFSNKGTKLD
GADIFIDIRNKIMEERLREAKERAASIAWWNSLRCQKKPTYSTTLRNLLTVKYPVDDIHY
QKADRLSYLFSSKLADIVFSPVERFQKMIDLVEGFMFAIPAARVPPPVCWCSKSNASVFL
HPSYKEKCSELLLPLLSPIRPAIVRKQLYFPDRRLIQFDCGKLQELATLLRKLKSEGHRA
LIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGG
VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKAIR
SVLLMTCYQSGNYNTEFLDVQTVAAAAAAAGEAISLFEXQLRPIDQYAIRFKELWDPIID
KAAAETEVNFEEREWELDRIENIRRXMEAEIDDDEEPLVYESWDADFATEAYRQQVEALA
QHQLMEELECEAKRKEDADDANLALTRNDMAIVPRPKSKKKPKKKFKSLKKGSLGSGLKS
VKEESKMESMSIDGDFYDEEVTGSDTVSPTSSMQKKRKKSEVTRDQKQENNSKKKSKKTK
KMSHQICPSDVDFNQAGNQHDDMESKLRDVILIDLEHKPASKGKTGGKIFITAVPLKRVL
MIKPEKLKRGNIWSRDCVPSPDLWLPQEDAVLCAVVHEYGPHWSLVSETLYGMTAGGIYR
GRYRHPVHCCERFRELVQRYVLSAHDFSVSDKPSNTGSGKALLKVTEDNIRMLLNVAAEQ
QDTELLLQKHFTALLSSVWRVTSRTEHRQNLSSGNGLYSGGRLFGSPICQSSRSLIREPA
QRMKFTNSGSKLLATALHDANIRERNDMISLSNWKEDAPVATDKLEITLEFPREGDDDVI
PLPPAINLSICGFDPLMCVNNTVGEDNHLKSSQAIAESRFRYGLKPFMLS
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttcccacttcaggatgatgaaacaaccttatcagaagaggagaaactagca
gaagctgattcaaacagccctttggatgagattgctttactgcaaaaggagagtgaaatt
cctgttgaggaattgattgcaaggtataaaaaggatttcaatgttgctgaaatttctgag
gatgagtctgaatatgcctctgccttctcagaggacccattggattctagcacccaagaa
gacattgagatcaagcagcaggataattctttaaacgaaaactttggtcatgaatctgtg
ccaactctatctcccgttagagagcaggaagccggatctgatgaaaaattagaaggaagc
ggaagtgacaatagacttgctgatgctgctgctgctgcgcgctccgctcaacctacaggc
tatacattctcaacaacaaaagtgcgtacaaaacttccatttcttctcaagtattccctt
cgtgagtatcaacacattggtctggactggcttgtcaccatgtatgagaaaagattaaat
gggattttggcggatgaaatggggctagggaaaaccataatgacaattgctttgcttgcg
catctagcttgtgaaaagggaatatggggccctcatctcattgtggttcctacaagtgtt
atgcttaactgggaaactgaatttcttaaatggtgtcctgccttcaaaattctgacatac
tttggtagcgcaaaagagcgaaagcttaagaggcaaggttggttgaaggtgaattccttt
catgtctgtataactacttacagacttgttatccaggattcaaaagtcttcaagcgcaag
aagtggaaatacttgattttggatgaagcacatctgattaaaaattggaagtcccagaga
tggcaaactcttttgaactttaattcaaaacgacgaatcttattaactggtacgccattg
cagaatgatctcatggaactctggtcattgatgcatttcttgatgccccatgtttttcag
tctcatcaggaatttaaggactggttcagtaacccaattgcaggaatggtagaaggacaa
gaaaaagtgaacaaagaagttgttgaccgcttgcataatgtccttcgcccattcatactt
cggcgattgaaaagggatgtggagaagcagcttcctaaaaaacatgagcatgtcatatgt
tgtagactctcaaagaggcagcgcaacttgtacgaagactttattgctagttcagagaca
caagctacgcttgcaagtgccaattttttcgggatgataggtattataatgcagcttcgc
aaagtttgcaatcaccctgacttatttgagggccgtcctattgtaagttcttttgatatg
gctggtattgacatccagttgagttcttctgtttgttctatcctctcgtcaagtctattt
tctactatagatctaaagggtttgggacttttgttcactcataatgatttcagtatgact
tcttgggagagtgatgagttaaaagcaattgctacaccgtcaagcttaatcagggaacgt
gtttctgcagataatctggaagaaattgctccattctccaataaagggacaaagttggat
ggagcagatattttcatagacattcgtaacaaaatcatggaggaacgattgagagaagcc
aaggaaagggcagcatctattgcctggtggaattcactgagatgccagaaaaaacctacc
tattcaacaactttacggaatcttcttacagtgaagtatcctgtcgatgatattcattat
cagaaggctgatcgtttgtcctacttgttttcttcgaagcttgctgacattgtattttct
ccagttgagcgcttccaaaagatgattgatctggtggaaggtttcatgtttgcaatacca
gcagcaagagtaccaccacctgtttgttggtgcagcaaaagtaatgcctctgtgtttctg
cacccatcttataaggagaagtgctccgaattattgttgccccttctatcaccaattaga
cctgccattgtgcggaagcagctttattttccagataggaggctgatacaatttgactgt
ggtaagcttcaagagctggcaactttgttgaggaagctgaaatctgaaggtcatcgagcg
ctaatattcacacagatgacgaagatgcttgatatcttggaggctttcatcaatttatat
ggttatacttacatgcgtttagatggttcaacacagccagaggagaggcaaacattaatg
cagcgttttaatacaaatccaaagatctttcttttcatcttgtcaacccgaagtggggga
gttggtattaaccttgtaggagcagatacagttatcttctatgatagtgactggaatcct
gccatggatcagcaagctcaagatcggtgtcatcggattggtcagacacgtgaagttcat
atctaccgcttgatcagtgagagcaccattgaagaaaatatcttaaagaaagcaatcaga
agcgtgctcttgatgacttgttatcagagtggtaactataacactgaattcctggacgtg
caaacagtggcagctgctgctgcagcagctggagaagctatctctttgtttgagnatcaa
ttacgtccaattgatcaatatgcaatacgctttaaggaattgtgggatccaatcatagat
aaggcagctgccgaaactgaagttaactttgaagagagggaatgggaacttgatcgtatt
gaaaatataaggaggnnaatggaggctgagattgatgatgatgaagaacctcttgtttat
gaaagttgggatgctgattttgcgactgaggcatatcggcagcaagttgaagccttggct
cagcatcagttaatggaagaactggaatgtgaagctaaaaggaaggaagatgcagatgat
gcaaatttagctttgacaaggaacgacatggccattgttccccgaccaaagtctaaaaag
aaaccaaagaaaaagttcaaatccctgaagaaaggatctctgggttctggactgaagtct
gtaaaagaagagtcaaaaatggaatctatgtccatagatggtgatttttacgacgaggag
gtcactggttcagatactgtgtcacccacttcgagtatgcagaaaaagcggaagaagtct
gaagtaacacgtgatcagaaacaagaaaataattcaaagaagaaatctaagaaaaccaag
aagatgtctcatcaaatctgtccttcagacgtggatttcaaccaggctggtaaccagcat
gacgatatggagtcaaagcttcgtgacgtcattcttattgatcttgagcacaaaccagca
agcaaaggtaaaactggtggcaaaatttttatcactgcggtaccactgaagcgggttttg
atgataaagccagagaagttaaaaagaggaaatatttggtcaagggattgtgtcccgtca
cccgatttgtggttgccacaggaggatgctgtattatgtgctgttgtacatgaatatggt
ccacactggagtttggttagtgaaacattatatgggatgactgccggtgggatttatagg
ggtagatatcgccaccctgttcattgttgtgagaggtttagagaactagttcaaagatat
gtcttgtctgcgcatgacttttctgttagtgacaaaccgagcaatacaggctctggaaag
gctcttcttaaagtaacagaggataatattcggatgctcttaaacgttgctgctgagcag
caagatactgaattgcttcttcaaaagcacttcacagccctgctttcatctgtgtggagg
gtgacatctcgcactgagcaccgtcaaaatctctcgtctggtaatggtctctattcaggg
gggaggctttttggttcacctatatgccaaagttcacgaagtttaataagggaacctgca
caaaggatgaaatttacaaattcagggagtaagttattggccactgcgcttcatgatgca
aacattagagaaaggaatgacatgatttccctttccaattggaaagaagatgctcctgtt
gctacagataagttggaaataacattggaattcccaagggaaggagatgacgatgtgatt
ccactgccacctgccataaatttatctatatgtggttttgatccattaatgtgtgtaaat
aatactgtaggagaagataaccatcttaaatcttcacaagctattgctgagagccgtttc
aggtatggccttaagccttttatgctttcatga
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