KEGG   Carica papaya (papaya): 110816920
Entry
110816920         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1A
  KO
K18757  la-related protein 1
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110816920
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110816920
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 110816920
NCBI-ProteinID: XP_021900970
LinkDB
Position
Unknown
AA seq 912 aa
MVMAENEIGDDQRELSGRKSPWKTPMLDGKSTDAPLMGGEAWPALADAQQRPRNPPGVDG
VAQNPASDPPIVQEVVGQQKSHGAGNTNSSHKHPPTRHQKPGSKRNPNAVPHFPVPLPYH
QPPLPPVFHAMVPPPQIAVTGYAYPSFPGPFPNVEAPLVKPGSEKQVQSLVRPVQLGPRG
DPNAYAVNFLIKANVQEPGGQFNHPWHHQRAFGHRDAINMQQGIGPRLYVRPPFLGPAPG
FMVGPSFPGPVCFMPVPPPGAIRGPHPPRFVPYQINVGAPVVGPETLALKANIVKQIEYY
FSDENLQNDHYLISLMDNQGWVPISTIADFKRVKRMSTDIPFILDALQSSSSVEVQGNKI
RRRNEWPRWIPRSAEDTSLSKTETKDKLGGNVADSFRTNNPILDNTRETENLQEHISCNQ
KTSEISPCAEDDSDCVLVVDKSQVTGDENNISSGKLICESAVQFLDLGTNYIASPVDRSQ
ESEPSKSSDNGTERLEVLPDMIQANVGNLSTDFANTFMLDEELELEQRTSRKDDLSTVRR
MDDEDDEMAVNDQDVQRLVIVTQNSEISEGNRAGGVDAKSISRELASAINDGLYFYEQEL
KTKRSNRRRNNSNLENGDGNSRSSTSVSGISNSKGGENSGGVNVPEESGTSNIRRKQNKG
FSKQQFSHKQRFFSSNFRNQGSNRNSHGPVSESPPSNSVGFFFSSTPPENHGPRLSKLSV
SPHGSLSGSSPPVGSLPKSFPPFQHPSHQLLEENGFKQQKYLKFHKRCLSERKKLGIGCS
EEMNTLYRFWSYFLRDIFVPSMYNEFRKFALEDASANYNYGIECLFRFYSYGLEKEYQED
LYKDFEQLTLDFYNKGNLYGLEKYWAFHHYRSLRDQKEPVKKHLELERLLREEYRSLDDF
RAKERSTTASSR
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggtgatggcggagaatgagataggggatgatcagagggagttgagtgggcgtaagtcc
ccatggaaaactcccatgctagatgggaaaagcactgacgctccgctaatgggcggagag
gcttggcctgcgttggctgacgcgcaacaacgacctagaaatccccccggtgttgatggg
gttgctcagaatccggcttcagatccgccaatcgttcaggaagtggttggacagcagaag
tcacatggggctggaaacaccaattcttcacataaacatccgccaacacgtcatcaaaaa
ccaggctctaaacgcaacccaaatgctgtaccccattttccagtacccttaccttatcat
caaccaccattaccacctgtatttcatgccatggtacctccaccacaaattgcggttact
ggatatgcttacccatctttccctgggccctttccgaatgttgaagctccattagtaaag
cctggaagtgagaaacaggtgcaatcacttgttcgcccagttcagctaggtcctcgagga
gatcccaatgcatatgccgtcaattttctaataaaggctaatgtacaagaacccggtggc
caatttaatcatccttggcatcatcagcgggcctttggccatagagacgctattaacatg
caacagggtattggaccaaggctttacgtaaggccgccttttttgggtccagctccaggg
ttcatggttggtccaagctttcctggacctgtttgctttatgcctgttccacctccaggt
gctattaggggaccacaccctccacgttttgttccatatcaaataaatgtaggagctcca
gtggtcggcccagaaacactagctttgaaagctaatatagttaaacagattgagtattat
ttcagtgatgaaaatcttcagaatgatcattatctgatttccttgatggacaaccaagga
tgggttccaatatccaccattgcagactttaaaagggttaaaagaatgagtacagacatt
ccatttatccttgatgcactgcaaagttcaagctctgtagaagtgcagggtaacaagatc
cgtagacgtaatgagtggcccagatggattcctcgttctgcagaggatacttcattgtca
aaaactgagaccaaggacaaacttggagggaatgttgctgattctttcaggaccaataat
cccattttagacaacacaagggagactgaaaatttgcaggagcacatatcgtgcaaccag
aaaacttcagaaatatcaccttgtgcagaagatgacagcgactgtgttctagttgttgat
aaaagtcaagtcactggtgatgaaaacaatatctcaagtgggaaactgatttgtgaatca
gctgtccaatttttggatcttggcaccaattatattgcgtcccctgttgaccgctcacaa
gaaagtgagccatcaaaatccagtgacaatggaaccgaaaggctggaagtgttaccagat
atgatccaagcgaatgttggtaacctgtcaactgattttgcaaacacatttatgcttgac
gaagaattagagcttgagcaaagaacatcaaggaaagatgatctttccacagttagaagg
atggatgatgaagatgatgagatggctgtcaatgatcaagatgttcagaggcttgtaatt
gtcacccagaatagtgagataagtgaaggaaatagagctggtggcgtggatgcaaaatca
atttccagggagcttgcttctgcaatcaatgatggtctttacttctatgaacaggagctg
aaaactaaacggtccaaccgaagaaggaataactctaatcttgagaatggagatggaaac
tcaaggtcttctaccagtgtttcaggaatatcaaattctaaaggaggtgaaaattctgga
ggggtaaatgttcctgaagagtctggaacttctaacatcagaaggaagcaaaataaaggc
ttctccaaacaacagttctctcataagcagcgatttttctccagcaacttcaggaatcag
ggaagcaatcggaactctcatggacctgtgtcagaaagtccacctagtaattcagttgga
tttttctttagttccactcccccagaaaatcatggtcctaggctttcgaagttgagtgtc
tcaccacatggttctctctctggaagtagtccacccgtgggctcactgccaaagtcattt
ccaccatttcagcatccaagtcaccaactgttggaagaaaatgggtttaaacaacagaag
tacttgaagtttcataagcggtgccttagtgagaggaagaagctgggaattggttgcagt
gaggaaatgaacactctctacaggttctggtcatatttccttagagatatatttgtccct
tctatgtataatgagtttcggaaatttgcactcgaggatgcttctgctaattacaactat
gggatagaatgccttttcaggttttacagttatggtttggagaaggaatatcaagaagat
ctttataaggattttgagcagctcactcttgacttctacaataaaggcaatctttatggc
cttgaaaagtattgggcatttcaccattatcggtcactgcgggaccagaaagaacccgta
aagaaacatctggaattggaaaggttgcttagggaagaataccgtagcttggatgatttc
cgtgcaaaggagcgtagtacgacagcaagcagccgttga

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