Carica papaya (papaya): 110816955
Help
Entry
110816955 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110816955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpap04131
]
110816955
Membrane trafficking [BR:
cpap04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110816955
Hops complex
110816955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf_RING_Vps8
zf-RING_Vps41
zf-rbx1
zf-RING_11
Nup54_57_C
RPN1_RPN2_N
zf_RING_Vps8_fungal
zf-RING_UBOX
Phage_Mu_Gam
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110816955
NCBI-ProteinID:
XP_021901029
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MDQGGPVFTVDLLERYAAKGRGIITCMAAGNDVIVLGTSKGWVIRHDFGVGDSSDIDLSA
GRTGEQSVNKVFVDPGGSHCVATVVGGSGPDTYYIHAKWSKPRVLSRLKGLVVNAVAWNR
QHITEGSTKEVILGTDNGQLFEIAVDEKDKREKYMKFLFELTELPEAFMGLQVFFNLSLF
CFAVGTELPISISPLELYINIDSLFLYLQQXESVFASYKERAVHFMELPGEIPNSELHFF
IKQRRATHFAWLSGAGIYHGGLNFGAQHSFPNGDENFVENKALLNYSKLCEGAEVVKPSS
MAVSEFHFLLLIGNKVKVVNRISEQIIEELQFDLMPESVSRGIIGLCSDATAGLFYAYDQ
NSIFQVSVNDEGRDMWKVYLQMKDYTAALASCHDPLQRDQVYLVQAEAAFATKDFLRAAS
FYAKISFILSFEEVTLKFISIGEQDALRTFLLRKLDNLAKEDKCQITMISTWATELYLDK
INRLLLEDDAALENCSSEYHLIIKEFRAFLSDCKDVLDEATSMRLLESYGRVEEVVYFAS
LKEQYEIVIHHYIQQGEAKKALEVLQKPAVPVDLQYKFAPDLIMLDAYETVESWMAMKHL
NPRKLIPAMMRYSSEPHAKNEIHEVVKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDESSL
LRFLQCKFGKGIENGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDP
ELAMAEADKVEDDEDLRKKLWLMVAKHVVEQEKGAKRENIRRAIAFLKETDGLLKIEDIL
PFFPDFALIDDFKEAICSSLEDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVVDR
DEECGVCKRKILTAAGEYRMTQGYTSAGPMAPFYVFPCGHAFHAQCLIAQVTRCTDEIQA
EYILGLQKQLTLLGSEVRKDQNGSLTEESITGMTPANKLRSQLDDAIASECPFCGDLMIR
EISLPFILPEEAEQVSSWEITPHNLAKQRSFSLSV
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggggggccagtatttacagtagatcttcttgagagatatgcagcaaaaggg
cgtggtataattacttgtatggcagctgggaatgatgtaattgtattgggaactagtaag
ggatgggttatcagacacgactttggggttggagattcctcagatattgatctatctgct
ggtagaaccggggaacaatcagtcaacaaggtttttgttgatcctggaggtagccattgc
gttgcaacggtagttggaggtagtggacctgacacttattacattcatgctaagtggagc
aaacctcgtgtattaagcaggctgaaaggtcttgttgtgaatgctgttgcttggaatagg
caacacataacagaaggttccacaaaggaagtcattcttggcacagacaatggccaactt
tttgagattgctgtggatgagaaggacaagagagagaagtacatgaaatttttgtttgaa
ttaacagaacttcccgaagctttcatgggtttgcaggtattttttaatttatctttattt
tgttttgcagtgggcacggaattaccaatttctatatctcctttggagctttatatcaat
atagattctttatttctatatctccaacagtaagaatctgtttttgcaagttataaagag
cgtgcagtgcactttatggagcttcctggggagataccaaacagtgaactacatttcttt
atcaagcaaagaagagctacccattttgcatggctttcaggggcaggaatctaccacggt
ggccttaattttggggctcaacatagtttcccaaatggtgatgagaattttgtggagaac
aaggctctgttgaactactcaaaactgtgtgaaggtgctgaagtggtcaaacctagttcc
atggcggtgtctgaatttcatttcttgcttcttattggcaataaggttaaggttgtaaat
aggatcagtgagcaaatcattgaagaactgcagtttgatctaatgccagaatcagtttca
cgaggtataattggattatgtagtgatgctactgcaggactcttctacgcatatgatcag
aactctatctttcaggtttctgtcaatgatgaaggccgagatatgtggaaggtgtatctg
caaatgaaagattacactgcagctttggcaagttgtcatgatccactccaaagagaccaa
gtatatttagttcaggctgaagctgcatttgccaccaaggactttcttcgagcagcatca
ttctatgcaaaaatcagtttcatactatctttcgaggaggtaacactgaagtttatcagc
ataggtgaacaggatgctctaagaacatttttattgcggaagcttgataatcttgcaaaa
gaagacaaatgccaaataacaatgatatccacatgggcaactgaattgtacctggacaag
atcaaccggctacttttggaggatgatgctgcattagagaattgtagttcagagtatcac
ttgattattaaagagttccgcgcattcttaagtgattgcaaggatgtattggatgaggca
acttcgatgagacttttagaaagttatggtagagttgaagaagtggtatattttgctagc
ctcaaggagcagtatgaaattgtcattcaccattacattcagcaaggggaagcaaagaaa
gcattggaagtgcttcagaaacctgctgttccagttgatcttcagtataagtttgctcca
gatctcatcatgcttgatgcatatgaaactgtggaatcatggatggccatgaaacatctt
aacccaaggaaactgattcctgcaatgatgcgttattccagtgaacctcatgcaaagaat
gaaatccatgaagtagtcaaatatttggaattttgtgttcatcgtctgcataatgaggat
ccaggggttcacaacttgctgctctcattgtatgccaagcaggaagatgagagttccctt
ctgcgcttcctgcaatgcaaatttggaaaaggaatagaaaatggacctgaatttttttat
gatcccaagtatgccttgcgcctttgcctcaaggagaagagaatgcgtgcctgtgttcat
atatatagcatgatgtccatgcatgaagaagcagttgcccttgctctacaggttgaccct
gagcttgctatggctgaagctgataaagttgaagatgacgaggacctgagaaagaaactc
tggctcatggttgcaaaacacgttgttgaacaggaaaaaggagctaagagggaaaatata
aggagggcaatagcatttctcaaggaaactgatggtcttttaaaaattgaggacatattg
cctttctttcctgactttgccctaattgatgacttcaaagaagcaatttgctcatccctg
gaggactacaacaagcagattgagcaattgaaacaagagatgaatgatgcgacacatggt
gcagataacatcagaaatgatatcagtgctcttgctcaaagatatgctgttgttgaccgt
gatgaggagtgcggggtttgcaaacgtaaaattttgactgcggctggggaatatagaatg
acgcaaggttatacatcagcggggccgatggcccccttttatgtatttccatgtgggcat
gccttccacgcacaatgcttgattgctcaagtcacacgctgtactgatgaaatacaagcg
gagtacattctcggcttgcagaagcagctaacattacttggtagtgaagtgaggaaggat
caaaacggcagcttaactgaggaatccataactggcatgactcctgcaaataagcttcgg
tcacagctggatgacgcaatagccagtgaatgcccgttttgtggtgacttgatgatccgg
gagatttcattgcctttcattctgcctgaggaagcggaacaggtctcttcttgggaaata
acaccccacaacctagcaaagcaaagaagcttttctctttctgtatga
DBGET
integrated database retrieval system
