Carica papaya (papaya): 110817192
Help
Entry
110817192 CDS
T05151
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap00040
Pentose and glucuronate interconversions
cpap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110817192
Enzymes [BR:
cpap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110817192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110817192
NCBI-ProteinID:
XP_021901318
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MEIPFNFLITLLVLAPTLVSSSSAVQDPELVVQQVQESINASRRNLGFLSCVTGNPIDDC
WRCDTNWEKNRKRLADCGIGFGKHAIGGRDGKIYVVTDPSDSDPVNPKPGTLRHAVIQDE
PLWIIFKRDMVIKLKQELLMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCK
RGGNAYVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS
NNYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHW
LMYAIGGSAAPTINSQGNRFLAPNNQNSKEVTKRENTSQSKWKKWNWRSEGDLMLNGAFF
TPSGAGASSSYAKASSLSARSSSLVTSITAGAGALKCWKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagatcccattcaattttctcattacccttcttgttttagctccaactttggtttct
tcatcttcagccgttcaagatccggaactggtagtacaacaagtacaagaaagcatcaat
gcatcgaggaggaatcttggttttttatcatgcgtaaccggcaacccgattgacgattgc
tggcggtgcgacacaaactgggagaagaaccggaagcgcttggctgattgcggcattggg
ttcgggaaacacgccattggaggacgagatggaaagatttatgtagtgactgacccgagt
gactccgacccggttaacccaaaaccagggactctccgtcacgctgtcatccaagacgag
ccgctctggatcatcttcaaacgcgacatggtgataaagctgaagcaggagctgctaatg
aactcgtttaagacgatcgacgggcgcggagccagtgtccatatcgccggcggaccatgc
atcaccatccagtacgtgactaatatcatcattcatgggataaacatacatgattgtaag
cgaggagggaatgcttacgtgcgggactccccatcgcattacgggtggaggactatatcg
gacggtgatggagtgtcgatatttggagggagtcatgtttgggtagatcactgttctctg
tcgaattgtaacgacgggttgattgatgctattcatggatcaacggctatcactatatct
aataattatatgactcatcataacaaggtcatgcttttgggtcatagtgattcatatacc
caagataagaacatgcaggtcacaattgcttttaaccatttcggtgaaggtcttgttcaa
agaatacccagatgcagacatgggtatttccatgtggtgaacaatgactatacgcattgg
ttaatgtacgccattggagggagtgctgctcccacaattaacagccaagggaataggttt
cttgctcccaataaccagaacagcaaagaggtgacaaagagggagaatacgtcacagagt
aaatggaagaagtggaattggaggtcagagggagacttgatgttaaacggtgcgtttttc
acgccatctggggcaggagcatcttcaagctatgcaaaagcttcgagtctcagtgccaga
tcctcttcactagtcacctccattacagcaggggctggtgcgcttaaatgctggaaaggc
tcgcgctgttaa
DBGET
integrated database retrieval system