KEGG   Carica papaya (papaya): 110817215
Entry
110817215         CDS       T05151                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110817215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110817215
   03041 Spliceosome [BR:cpap03041]
    110817215
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110817215
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110817215
Spliceosome [BR:cpap03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110817215
SSDB
Motif
Pfam: RRM_1 RRM_7 FANCI_S1-cap Merozoite_SPAM cas_Cpf1_2nd CCDC22_CC
Other DBs
NCBI-GeneID: 110817215
NCBI-ProteinID: XP_021901351
LinkDB
Position
Unknown
AA seq 469 aa
MAKKRKHDSKSSEPTEPPQKQQQHNKQQEEEQEQLQIEDQENIEDVEEEVEEVEEEEDEE
DEEGEGEDQDAGTVNSETNQADDEDDEPIEKLLEPFGKDQLTDLLREAAHKHRDVADLIR
KLADEDPVHRKIFVHGLGWDTKAETLVDAFKQYGEIEDSKAVTDKISGKSKGYGFILFKT
RTGARRALKQPQKKIGNRMTACQLASVGPVPTPTAQPSAPAQPVSEYTQRKIYVSNVGAD
LDPQKLHSFFAKYGDIEEGPLGLDKMTGKPKGFCLFVYRNVESARKALDEPHKNFEGHIL
HCQKAIDGPKPGKSQHQHHRNTHNSHFQRNDSGSFAGGAATGTGHLMAPSGPGIGANAAQ
ALNPALGQALTALFATQGAGLGLNPALGQALLGTLGSAAAVNPGVPSAGAGIQGGYGSQA
NISPGVIGGYGSQGGLQAAYPNQQMGQGGAGRGQHGVGQYGGVAPYMGH
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggccaagaagagaaagcacgattctaaatcttcagagcctaccgagccgcctcagaag
cagcagcaacacaacaaacaacaggaagaggagcaggaacaactccaaatcgaagaccaa
gagaacatcgaagacgtcgaggaagaagtcgaggaagtggaagaggaagaagatgaggag
gacgaagaaggggaaggcgaagaccaggatgcaggtactgtaaattctgaaacgaatcag
gcggacgatgaagacgacgaacctattgagaagctcctcgaaccctttggaaaagatcaa
ctcactgatctactgcgtgaggcagcccataagcaccgcgatgtagccgatctcatccga
aaactagccgatgaggatccagtgcatcgcaaaatattcgtgcacggcctcggctgggac
accaaagccgaaacccttgtcgatgccttcaagcagtacggggagatcgaggattccaaa
gctgtgacggataagatctccggtaagtccaaaggatacggtttcatccttttcaagact
cgcactggcgcccgcagggccctcaagcaaccacagaagaagatcggaaaccggatgacc
gcctgccaactagcatccgtcggacccgttccaactccaaccgcacagccttctgcccct
gctcagccagtctccgaatatacccagagaaaaatttatgtgagtaatgttggggccgat
cttgatcctcagaagctgcactctttcttcgccaagtacggcgatatagaagaagggcca
ttgggtcttgataagatgactggtaagcctaaggggttctgtttgttcgtctacaggaat
gttgagagtgcaaggaaggctttggatgagccacataagaacttcgaaggtcatatattg
cattgccagaaagcgattgatggccctaaaccaggaaaatcccaacaccagcatcatcgg
aacacccataactcacactttcagaggaatgatagtggcagttttgccggtggtgctgcc
actggtacaggacacttaatggcaccatcaggtcctggaattggagccaatgccgcgcag
gcattgaatccggcccttgggcaggctctgacggcattgtttgctactcagggtgctgga
ttggggctgaatcctgcactagggcaagctttgttggggacactgggctctgctgctgca
gtcaatccaggtgtaccatctgcaggggctgggatccagggtggctacggcagtcaggca
aacattagtccaggggtaattggtgggtacgggagccaaggtggccttcaggctgcgtat
cccaatcagcaaatgggacaaggcggggctggaaggggccagcatggtgtaggacagtac
ggtggtgttgccccatacatgggtcattag

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