KEGG   Carica papaya (papaya): 110817276
Entry
110817276         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03030  DNA replication
cpap03410  Base excision repair
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110817276
   03410 Base excision repair
    110817276
   03420 Nucleotide excision repair
    110817276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpap03032]
    110817276
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110817276
Enzymes [BR:cpap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110817276
DNA replication proteins [BR:cpap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110817276
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110817276
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 MtrB
Other DBs
NCBI-GeneID: 110817276
NCBI-ProteinID: XP_021901427
LinkDB
Position
Unknown
AA seq 2201 aa
MNGENRRWESKDSRRSRKQNVIRNAEEELESKLGFDLFSEGEKRLGWLLTFAPSSWEDPD
THKVYSCVDLYFVTQDGSSFKSKYKFFPYFYAATKSNMEMDVEAYLRRRYESQIANIEIV
GKEDLDLRNHLSGLCKNYLKISFDTVQHLMDVKRDLLHIIERNHAKFAAAEAYESVLAER
REQRLQDFLDFIVDLREYDVPYHVRFAIDNDVRCGQWYNVSISSTGVLLEKRADLLQRAE
VHICAFDIETTKLPLKFPDAEYDIIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKPEF
EGCFKVKNVKSELELLMQWFAHMREVKPGIYVTYNGDYFDWPFLERRAAYHGFTMSNEVG
FRCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRF
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMCPDEVLRKGSGTLCEMLLMV
QAYRGNIICPNKHQSDPEGFYKSHPLESETYIGGHVECLESGVFRSDLPTSFKLDSSGYE
QLINNLDRDLQYAVQVEGKMDLDSVSNYDEVKNEIMEKLVMLRDEPVRDECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLKK
QIESEFVEGTNGQLCKSFLDLPKIEQQSRLRERLKKYCQKAYKRVLDKPITEVREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCAL
PGSFPENFTFKTKDMKKKLTISYPCVMLNVDVARNNTNDQYQTLIDPITKTYSTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDEGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFPSWVNLEECYSAVAXCANRWLDLLQNQGKDIADSELLDYISESSTMSKSLAEYGEQ
KSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDSEIMKFY
LRKWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIVTIPAAMQKVANPVPRVVHPDWLHKRI
REKNDRFRQRKLVDIFSSSNRDDPLESTHDAIITNYVINEENVEDLEDLQNRRVQSLDGR
NPIVRSYEQRTGKAMNRPNSMQCKMDSVGSLEKQSSTLQKDFMASENIDKNVDYQGWLDL
KKRKWKETLEKRKRQRLGNLNTCSANATSRLLRDKVNYNDPQSRRGVSSYFTRPEVMLTR
CHWQIIQLVPSSQSGQFFAWVVVEGIMLKIPVTVPRIFYLNSKAHMMENFPGGHVNKTLP
HGKRSYNLIEVIIDEDQFKRESKKLWALLADPEIEGIYETKLPLDFNAILQLGCVCKVEK
SAKERNAQDGWSLNELHMKTTTECPYLEQSISFFYLYHSISAGRAVYLVYFPSSETLLVL
VVNPYQNKDLSPAILERQFREACQALSSKPPPQNDILYKVDYVGHVKDAEKILQREINEH
RHQYSGPIIALIECPDVPYMKAGIQSLNDLPCISIPFNARDNQYQLLSWQHPAAKIAVQR
CAASSQWLNERISLSRYAHVPLGNFEFDWVMFTADVFFSRALRDQQQVLWISDNGVPDLG
GVREEDTCFTDEVPQLLLTYPGAYRKVSVELKINHLAVNALLKSNQVNEMEGGALLSFEP
EVNSGAHGLNDRCDFDEAAACAPAFRVLKQLIQRCLSDAVTSGNVFADAMLQHLSRWLCS
PQSKLHDPALHRILHKVMEKMFALLLAEFRKLGATIIFADFSKIIIDTGKFDISAAKAYC
ESLLKALQSRELFEWIEIEPLQFWHSLLFMDQYNFGGIPAKHDEASLDKVDIVSSWNIAR
YLPEKVQDLFVFNISKFIYDPWKFAQNQGVVRTSAQNDSLCTPSITVAAAETFELHMVDY
LRQKIRSTFTETLLENVQDIVSHMKEMSRSQNAQVTGSVCKGDYALEFIKHVCAVLALDH
NVQHDVLVMRKNLLKYVHVREFAPEAEFHDPCPSFILRNVACSYCHDCRDLDLHGDAALL
AEEWCCAVPQCGHPYDREVMENALLQIVRQRERVYHLQDLICLRCNQVKAAHLAEQCECA
GSFRCRESASEFHNKMQIFLNIAKHKKYEVLEECISWILEI
NT seq 6606 nt   +upstreamnt  +downstreamnt
atgaatggagaaaaccggagatgggaaagtaaggattcgcggaggtccaggaagcagaat
gtaattcgcaacgcggaagaggagctggaatcgaagcttggcttcgatctcttctccgaa
ggcgaaaagcgccttggttggttgctcacttttgcaccttcgtcgtgggaggaccccgac
acccacaaagtttatagttgcgtggatctctattttgtaactcaggatggttcttctttc
aagtcgaagtacaagttcttcccttatttctacgcagccacaaaaagcaacatggaaatg
gatgtggaagcatatttgaggcgacgctatgaaagtcaaatagccaatattgaaattgtt
ggaaaggaggaccttgatcttaggaatcatttgtctggcctgtgtaaaaactacctaaag
atatcgttcgacactgttcaacatttgatggatgtgaagagagatctattgcatattatt
gaaagaaaccatgcaaaatttgctgctgcagaagcatatgaatcagtattagccgaaaga
cgggaacaaaggcttcaagattttttagattttattgtggatctccgtgaatatgacgtt
ccttaccatgttcgatttgcaattgacaatgatgtgcgctgtgggcaatggtacaacgtt
agcatatctagtactggtgttttgcttgagaaacgggctgatcttcttcaacgcgctgaa
gttcatatttgtgcatttgatatagagacaacaaagcttcctctgaaatttccagatgct
gagtatgatataataatgatgatatcatacatggttgatgggcaaggatacttgatcatt
aacagagagtgtgtaggtgaagatatagaagacctggagtatacaccaaaaccagaattt
gaaggatgcttcaaagtgaaaaatgtgaaaagtgagttagaacttctcatgcagtggttt
gcacatatgcgagaggtgaagcctggtatttatgtgacttataatggtgattattttgat
tggccctttcttgaacgaagagcagcttatcatgggtttacaatgagcaatgaggttgga
tttcgatgcgacaagaatcaaggagaatgtcgagctaaatttgcttgccatttggattgt
tttgcttgggtcaaacgtgatagctatcttccccagggaagccatggcctgaaggctgtt
acaaaggcaaagttgggttatgatccattggaggtaaatccagaggatatggttcggttt
gcaaaggaaaagcctcagatgatggcctcttactccgtttctgatgctgttgccacttat
tacttgtatatgacatatgttcatcccttcattttttcacttgccacgataattcctatg
tgtcctgacgaggttttgcggaaaggtagtgggacactttgtgaaatgcttcttatggtc
caggcatacaggggaaatattatctgccctaacaaacaccaatctgatccggaagggttt
tacaaaagtcaccctcttgagagtgagacatatataggtgggcatgtggaatgccttgaa
agtggtgttttcagatctgaccttccgactagttttaagcttgattcatcgggatatgag
caactgattaacaatcttgatcgagatctgcaatatgctgtacaagttgagggtaagatg
gatttagattcagtctccaattatgatgaagtgaagaatgaaatcatggaaaagcttgtg
atgttacgagatgaacctgtacgtgacgagtgccctcttatttatcatttagatgtggca
gcaatgtatccaaatattattttaacaaacaggcttcagccaccatcaatagttacagat
gaagtctgcactgcatgtgatttcaaccgtcctggcaagacttgtcttcggaagcttgaa
tgggtttggcgtggggagatattcatggcaaagaaaagtgactattatcatttgaagaaa
caaattgagtctgagtttgttgaaggcaccaatggtcaattatgtaaatcttttctagac
ctaccaaagatagagcaacaatcaaggctgagggagcggttgaagaaatattgccagaag
gcatataagcgggtacttgacaagccaatcactgaagttcgagaagcagggatatgcatg
cgggaaaatcctttttatgttgatactgttcgcagctttcgagataggagatacgagtac
aaaggccttaataaggtttggaagggaaagttgtcagaggccaaagcaagtgggaattct
atcaagatccaggaagcacaagacatggttgtgctttacgactccttacagcttgctcac
aagtgtatccttaactccttctatggatatgtcatgcgcaagggtgctagatggtactca
atggaaatggctggtgtcgtcacatacacgggagcaaaaattattcagaatgctcgattg
cttgttgaaaagattggaaaaccacttgaattagacacagatggtatttggtgtgcactt
cctggatcttttccagagaactttacttttaaaacaaaagacatgaagaagaagctgaca
atctcttatccatgtgttatgcttaatgttgatgtggcgagaaataatacaaacgaccaa
taccagacactcattgatcctatcacgaaaacgtattcaactcatagtgaatgctcaatt
gaatttgaagtggatggaccatacaaggcaatgattcttcctgcttctaaggaagaggga
attttgattaagaagcgatatgctgttttcaatgatgagggaacattggcagaacttaaa
ggttttgagatcaagcgtagaggtgagctgaaactcatcaaagtcttccaggctgaactt
tttgacaaattcccttcatgggtcaacttagaggaatgctactctgctgttgctngatgt
gcaaaccgctggctggatctcttgcagaatcaaggaaaggacattgcagatagtgagttg
ctagactacatatcagaatccagcacaatgagcaagtccttggcggagtatggtgaacag
aagtcatgtgcagttacaactgccaaacgccttgctgattttctaggtgatacaatggtc
aaagataaaggattgcgttgtcaatatatagttgcatgtgaaccaaagggaacacctgtt
agtgagcgtgcagttcctgttgcaatttttgaaacagattcagaaataatgaagttttat
ttgcgaaaatggtgcaagacttcatcagatgttggcattcgttccattgttgattggtcc
tactacaagcaacgacttagctctgctattcaaaaaattgtcacaatacctgcagctatg
caaaaggttgcaaatcctgtcccaagggtagttcatcctgattggctgcacaaaagaatt
cgtgagaaaaatgataggtttcgtcaacggaagttagttgatatcttcagctcatcaaac
agggatgatccactggagagcactcatgacgctataatcaccaattatgtgataaatgag
gagaatgttgaagatttggaagacttgcagaatagaagggtacaatctttagatggacgt
aatccaattgttcgcagctatgaacaacgtacaggcaaggcaatgaaccgaccaaattcc
atgcaatgcaaaatggattctgttggtagtttggagaagcagtcttcaacattacagaaa
gattttatggcctctgaaaacattgacaaaaatgtcgattatcaaggatggcttgatttg
aagaagagaaaatggaaagagacactagaaaagagaaagaggcaaaggttggggaatttg
aatacatgcagtgctaatgctacttctaggctgctaagggataaggtaaactataatgat
cctcagagcaggagaggtgttagttcatattttacaaggcctgaagtaatgttaactcgc
tgccattggcagataattcaactagttccaagttcacaaagtggccaattttttgcttgg
gttgttgtggaaggaattatgcttaagattcctgtaactgttccaagaatattttacctc
aattcaaaagcacatatgatggaaaattttcctggaggacatgtcaacaagactcttcct
catggaaagcgcagctataacttaatagaggtcataattgatgaagatcaatttaaaagg
gaaagcaagaaactttgggctctcctagcagatcctgaaattgagggaatatatgaaaca
aaactgccactggatttcaatgctattctgcagcttggctgtgtgtgtaaagtggaaaag
tcagctaaggaacgaaatgcccaggatggatggagtctgaatgaactacacatgaaaact
acaacggaatgtccttacctggagcagtcaatctctttcttttacttgtatcatagcatc
tctgctgggcgggctgtatatcttgtttattttccttcatcagaaactctattggttttg
gtagttaatccctatcaaaataaagacttgtcaccagcaatcctagaaagacaatttcgt
gaagcttgtcaggcattatctagcaaaccacctcctcagaatgatatcctttataaggtg
gactatgtcggacatgtcaaggatgctgaaaagattttacaacgagaaattaatgaacac
agacatcaatatagtggccctataattgctctcattgagtgcccagatgtaccttatatg
aaggcaggtattcaaagtcttaatgatctcccctgcataagcattcctttcaatgctcgt
gataatcagtatcagcttctatcgtggcaacacccagcagcaaaaatcgctgttcaacgt
tgtgctgcatcatcccagtggttgaatgagagaatttctctctcaagatatgctcatgta
ccattgggaaattttgagttcgattgggtaatgttcacagcagatgtcttcttttcaaga
gcgttacgtgatcagcagcaggtactatggatatctgataatggtgttccagacttagga
ggtgttcgtgaagaagatacatgttttactgatgaggtacctcaactactgcttacatac
cctggagcatatagaaaggtttctgtggagctaaagatcaatcacttggctgtgaacgct
cttctgaaaagcaaccaagtgaatgaaatggaagggggtgctcttttaagttttgaacct
gaagtgaattctggagcacacggtttgaatgaccgttgtgattttgatgaagctgccgca
tgtgctcctgcattccgtgtcctgaaacaactgattcagaggtgtctttctgatgcagtt
acatcagggaatgtatttgctgatgcaatgttgcagcatctatctcggtggctttgcagc
ccccaatcaaaacttcatgacccagctcttcaccgcatacttcacaaggttatggaaaaa
atgtttgcattgctgttggcagaatttcgcaaactaggtgctacaataatatttgcagat
ttctcaaagatcattatagacacaggaaaattcgatatttctgcagctaaagcttactgt
gaaagcttgctgaaggcacttcagagtagggaactatttgaatggattgaaattgaacca
ttgcagttctggcattccttgcttttcatggatcagtataacttcggtggaattcctgca
aaacatgatgaggcttcacttgacaaagtggatattgtatcaagctggaatattgctcgc
tacttgcctgagaaagttcaggatctttttgtttttaacatttctaagtttatatatgac
ccatggaaatttgcacaaaatcaaggtgttgtgagaacatctgcacagaatgacagctta
tgcactccatcaatcactgttgcagctgcggagacatttgaactgcatatggtagactat
ctcaggcagaagatcaggtccaccttcacagagacacttcttgagaatgttcaagatatt
gtttctcatatgaaggaaatgagtagatctcaaaatgcacaagttactggtagtgtctgc
aaaggagattatgctttagagttcattaagcatgtgtgtgcagttcttgctcttgatcac
aatgtccagcatgatgtcctggtgatgagaaagaatctattgaaatatgtacatgtgagg
gagtttgctccagaagctgagtttcatgatccctgtccttccttcattttacgaaatgta
gcttgcagttattgccacgactgccgagacctggatttacatggtgacgcagctttactg
gctgaggaatggtgctgtgcagttcctcagtgtggccatccttatgaccgtgaagtaatg
gaaaatgcacttctccaaattgttcggcaaagagagcgcgtctaccatctgcaagacctg
atatgccttaggtgtaaccaggtgaaagcagcacatttagctgaacaatgtgaatgtgct
ggctcattcaggtgcagggaaagtgcatctgagtttcacaacaaaatgcagattttccta
aacatagccaagcataaaaaatatgaagtcctcgaagagtgtatctcatggattttggag
atctaa

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