Carica papaya (papaya): 110817291
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Entry
110817291 CDS
T05151
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110817291
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
Other 90S particles
110817291
Pre-60S particles
Other pre-60S particles
110817291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
INTS1_R4
HEAT_GCN1
VPS15-like_hel
Motif
Other DBs
NCBI-GeneID:
110817291
NCBI-ProteinID:
XP_021901445
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MEGIDVEGSSMISTELQSDEFCESILDRFSSSTQEDHQHLCAVLGTMSQELKDQNIPLTP
VAYFGAACSSLDRLSSEPDPAGHVIESFMTILSLVLPKISPAILKKKGDFTSVLLLRVLR
SSSVTAGSVVSGLKCVSQLLITRDPANWSDLSQLYPLLLVYMTDSRSKVRRQSHHCIRDV
LQSFQGTPSLAPASEGIMNTFEKFLLLAGGSNANPNEGHGGALEVLHVLDALKECLPLMS
MKYLTSVLKYFKTLLELRQQLVTRRITDSLNAVCLHQNADVPAEALLDLLCSLAYSVSLN
ESSADAMTFTARLLNVGIKRIHDLNRQICVVKLPMVFNALKDILASEYEEAIFAATETLK
GLIDTCIDESLIMQGVNQIRNTNLDERKSGPTVIEKICSTIENLLDYRYSAVWDMALQVV
SAIFDKLGAYSSYFMRGTLKNLSDMQHLSEEDFPYRKQLHECVGSALGAMGPETFLSLLP
LKLEANDLSEANVWLFPILKQYTVGARLNFFTEVILGMVGIIRQKARKLEMEGRIFSSRS
ADALVYSLWSLLPSFCNYPLDTAESFKDLEKSLCAALQEQRDIRGIICSSLQILIKQNKE
IAEGKDVLSSVDASTAMQCALSHYTPQVATGNLQVLRLYSRELLSVLSGIFMESEKDYGG
CLQSLIGEFASIAEKKVTKILYRKAMHKLLEVTQLAGKPESSRNNCMQIDDLSNQKSPSV
IRARLFDLAVSLLPGLDSEESDVLFTAIKPALQDVEGLIQKKAYRVLSVLLKKDEFLSPK
LEELLGLMIEVLPSCHFSAKRHRLDCLHFLVVRAISKDGWEQRRCEILSSFLTEIILTLK
EANKKTRNRAYDVLIQIGHAYGDEENGGNKENLHQFFNMVAGCLAGETPHMISAAVKGLA
RLAYEFSDLISTAYKLLPSTFLLLQRKNKEIVKANLGLLKVLVAKSQTEGLQAHLRSLVE
GLLKWQDATKSHFKAKVKLLLEMLIRKCGLDAVRAVMPEEHMKLLTNIRKIKERKERKLA
ANSDEDHSRLSKATTSRFSRWNHTKIFSDIGDEGEDSDAENTNGQSKASSLLKSKASSLR
SKRNRGLNKSLPEDLFDQLEDEPLDLLDRLKTRSALRSSENLKRRCESDDEPEIDSEGRL
IIREGGKLKRLLASDHNSDARSEAGSLFSVNSVRTQKRRKTLESGWAYTGTEYASKKAGG
DVKRKDKLEPFAYWPLDRKMMSRRPEHRAAARKGMASVVKMTKKLEGKSASTLLSSKFMK
SKRIQKRGSKKSK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatcgacgtggagggaagctcaatgatctcgactgaattgcagtcggatgaa
ttctgtgagtcgatccttgatcggttctcaagttctacgcaagaggatcaccagcacctt
tgtgcagtgctaggcaccatgtctcaggagctcaaggaccagaacatccctctgacgcca
gttgcctattttggcgctgcatgctcctccctcgaccgtctctcctccgaaccagaccct
gccgggcacgttattgagtccttcatgaccattctttccctagtgctgcccaaaatctcg
cctgcaattttgaagaagaagggagattttacctcggttctccttctcagggttctccgg
tcgagttcggttacggctggttcggttgtttcaggtttaaaatgcgtgtctcaactatta
atcaccagagatccagctaattggtctgacttgtctcagttgtaccctcttttgttggtt
tacatgactgattctcgttctaaggtgagaaggcagtcgcatcattgtatccgtgatgtc
ttacaaagtttccaagggacaccgtcactggcccctgctagtgaagggatcatgaacaca
tttgaaaagtttcttctactggctggtggatcaaatgccaatcctaatgaaggtcatgga
ggagctctagaggttctccacgttctagatgcacttaaagagtgtcttcctctgatgtca
atgaagtacttgacttctgtgcttaagtacttcaaaactctattggaacttcgccagcaa
cttgtgacaaggcgcataacagatagtctgaatgcagtttgtcttcaccaaaatgcagac
gttccagctgaggcactgcttgaccttctgtgctcacttgcctattctgtctcattgaat
gaatcgtcggctgatgccatgaccttcactgctcggttgctgaacgtgggtattaagaga
attcatgatcttaataggcaaatatgtgtagttaagctccccatggtattcaacgcactt
aaagatattttggcatcggaatatgaggaggccatatttgcagccacagaaacattgaag
ggtctgatagatacttgtattgatgaaagtttaattatgcagggagtgaatcagattaga
aacacaaacttggatgagcgaaaatctgggccaactgtcattgaaaaaatatgctcaact
attgaaaacttacttgattaccgctacagtgctgtctgggacatggcacttcaagttgtt
tcagctatctttgataaattaggtgcttattcttcttatttcatgagaggaactcttaag
aatttgtcagatatgcagcatttgtcagaagaagattttccatatagaaagcagctacat
gaatgtgtaggatcagctcttggtgctatggggcctgagacatttctaagccttctgcct
ctgaagttggaggctaatgatctttcagaggcaaatgtctggctctttccaattctgaag
caatatactgttggtgctcgcttgaacttcttcacagaggtcattttgggtatggttgga
atcataaggcagaaagcccgaaagcttgagatggaaggacgaattttctcatcaaggtct
gctgatgctcttgtctactctttatggtcgttgttgccttcattttgcaactacccattg
gatactgctgagagtttcaaggatctagagaaaagtttatgtgctgcccttcaagaacaa
cgagatattcgtggaattatatgttccagcttgcagattctgattaaacaaaataaagaa
attgcagagggcaaagatgttttatccagtgttgatgcaagtactgctatgcagtgtgct
ctatcccactataccccgcaggttgcaactggcaatttgcaagtacttcggttgtattct
cgtgaactgttatccgttttgtcagggatcttcatggaatcagaaaaagactacggtggt
tgcttacagtctttgattggtgagtttgcttccatagcggaaaaaaaagttaccaaaatt
ttatacagaaaggcaatgcacaagcttttggaagttacacagttggctggaaagcctgag
agctccagaaataattgtatgcagattgatgatttgtcaaaccaaaagtcaccatctgtt
ataagggcacgtctatttgacctggcagtttcacttttacctggtttggattctgaagag
agtgatgtcttattcactgcgataaagcctgcattacaggatgttgaaggtttgatccaa
aagaaagcatacagagttctttcagttcttctcaagaaggatgaatttctttcaccaaag
cttgaggagttgctcgggcttatgattgaagtgctgccatcatgtcatttttctgccaag
cgccatagacttgactgtttacattttctagtagtgcgtgccatctctaaggatgggtgg
gagcaaaggcggtgtgagattcttagttctttcctaactgaaataatacttactctgaaa
gaggctaataagaaaacaagaaatagagcatatgacgtgcttatacaaattggtcatgca
tatggagatgaggaaaatggtggcaataaggaaaacttgcatcagttcttcaacatggta
gctggatgcttggctggagaaactcctcatatgattagtgctgctgtcaaaggcttggct
cgcttggcttacgaattttctgatctgatttctactgcctacaagttgcttccttctaca
ttcctcctcctccaaagaaagaacaaagaaattgtaaaagctaatttaggcctactgaaa
gtattagtggccaaatcacaaactgaagggttgcaagcacacttgaggagtttggtggaa
ggcctgttgaagtggcaagatgctactaaaagtcattttaaagccaaggtcaagcttctt
ttggaaatgcttatccgaaaatgtggcctggatgctgttagggccgtgatgcctgaagaa
cacatgaaattacttaccaacatacgaaagatcaaggaacggaaggagaggaaacttgca
gctaattctgacgaagatcattctcggctctcaaaagcaactacatccaggtttagtaga
tggaatcatacaaaaatattttctgatattggcgacgaaggtgaggacagcgatgctgaa
aacacaaatggtcaaagcaaggcatcttcactgctgaaatctaaggcatcttctttacgg
tccaagagaaatcgtggccttaataagagcttgcctgaagatttgtttgatcaattagaa
gatgaaccactggatttacttgatcggctcaaaacaaggtcagctcttcgatcatctgaa
aacctcaaaaggaggtgtgaatctgatgatgagccagagatagattctgaagggcgattg
ataattcgcgaaggagggaaactgaaaaggttgttggcctctgatcataactcagatgca
aggagtgaagctggcagtctgttttcagtgaactcggttagaacgcaaaagcgaaggaaa
acattagagtctggatgggcatacaccggtaccgagtatgccagcaagaaggcaggtgga
gatgtaaagaggaaggataagcttgaaccatttgcatattggccccttgatcgtaagatg
atgagccgtagacctgagcatcgggcagctgctagaaaaggtatggcaagtgtagtgaag
atgactaaaaaacttgaagggaagagtgcctcgactttgctctcttcaaaattcatgaag
tcgaagaggattcagaagagaggcagtaaaaaaagcaagtaa
DBGET
integrated database retrieval system