Carica papaya (papaya): 110817477
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Entry
110817477 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpap04131
]
110817477
Membrane trafficking [BR:
cpap04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110817477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
110817477
NCBI-ProteinID:
XP_021901711
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MASNPPFQLEDQTDEDFFDKLVDDDFGPAESLSSGAPKFAEGNESDDARAFANLSIGEDS
GGEDRLHEPNMENDSVDVGATGPLLGEHADEQSDSSLVGANASGLDSGNMAESNTEGLGP
KETASVSESTAAASLSGGSLGSGVKEVGWSSFYADVSDNGEHNFGTYSDFFSDLGESSGA
FPGQVEDNVNGRGEVVSAKEGNNLADNSFNYLHHQDGQMNGNPMDQTANYQDLNSSQYWD
NLYPGWMYDHNTGQWYQVDGYDAKVSPQVSYENSATEWGGVSDEKSELSYMQQSSQSVLE
NVVETSTTKSVSHWNQANNGYPEHMIFDPQYPGWYYDTIAQEWRSLESYNAATQSTVQAH
DLQNQDDYASRGTYLGENNSLSGQPDSRALEGLGNQAQHDGWTESYGNYDQQGLHMWQPE
TLTKTETANTTTLSNFGGNHHVGNFYGSNSSIINHVDQQRSFNSRGAVQSYDKAAKAHVE
ANGITGIQSFVPSVNFSQQFNPASVKQSEQMIFSNEFYGNQNQVNVAQQCSVGNSISVLN
XMEAVTVNTNASDVGGGTCEYFRSLCQQSFPGPLVGGNAGSKEVNKWIDERIANCESSDI
DYKKREVMRLLFSLLKIACQHYGKLRSPFGSDSTLRESDTPESAVAKLFASAKKDGRQYN
AYSALGHCLQHLPSEGQMRATATEVQNLLVSGRKKEALQCAQEGQLWGPALVLASQLGDQ
FYVDTVKQMALRQLVAGSPLRTLCLLIAGQPADVFSTDNTSDSSFPGPMNVSQQQAQFGT
TGMLDDWEENLAVITANRTKDDELVIIHLGDCLLKERSEISAAHICYLVAEANFEAYSDS
ARLCLIGADHWKSPRTYASPEAIQVLFXIVFSIPYXSQFILLPFQPYKLIYAYMLAEVGR
VSDALKYCQAVLKSLKTGRAPEVESWRQLVLSLEERIRTHQQGGYTANLAPAKLVGKLLN
FFDSTAHRVVGGLPPPVPTHGNIQANELHAPRVSSSQSTMTMSSLIPSASMEPITEWAAD
GTKMTLQNRSVSEPDFGRTPRQVDSSKEATSSSAQGKAPVSRFGRFGFGSQLLQKTVGLL
RPRSDRQAKLGETNKFYYDEKLKRWVEEGAEPPAEEAALPPPPTTSAFQNGLSDYNPKPA
TKSEGSPTSGSPKFSSLSPTEYSSGMPPIPRSSNQFSARGRMGVRARYVDTFNKGHGNSA
NLFQSPSVPSVKPAVSANTKFFVPTAATTSEQPMEAIAESAQEEIGANENPLSSTANDLF
QTPTSSSVAMQRFPSMDNIASKRVVTSGNGPSAHSRRTASWSGGTFNTALSSNTAEPKSL
GEALRMPPFMPSAPNGSSSSFGDDLHEVEL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatcctccattccagttggaggatcagacagacgaggatttctttgacaag
ctggtcgacgacgattttgggcccgccgagtcattgtcgtccggtgctccgaaatttgcg
gaaggaaacgaatcagacgacgcgagggccttcgcgaatctgagcatcggcgaggattcg
ggtggagaggatcggttacacgagcctaatatggagaacgattctgttgatgtgggtgca
acggggccgttactgggcgaacacgcagatgagcagagtgattcctcattggttggcgcg
aatgcttctgggcttgacagtggcaacatggctgagtcaaataccgaaggtttaggaccg
aaggagacagcgtctgtatctgagtcaactgccgcagcgagcctgagtggtggatctctg
ggttctggggttaaggaggtgggttggagctccttctacgcggatgtatcagacaatggt
gagcataattttggtacgtactcggattttttcagtgacttaggtgagagttctggggct
tttcctgggcaagtggaagataatgtgaatggtagaggggaggttgtctccgcaaaagaa
ggaaataatcttgcagataattcattcaattatttacatcatcaggatggtcaaatgaat
gggaatcctatggatcagacagcaaattatcaggatttgaatagcagtcagtactgggat
aatctgtatccgggatggatgtatgatcacaatactgggcagtggtatcaagtggatggt
tacgatgcaaaggtgagtccccaagttagctacgagaattcagctactgaatggggcggg
gtttctgatgagaaatcagagctttcttacatgcaacagagctcgcagtctgttttggag
aatgttgtggagactagcacaaccaaaagtgtttctcactggaaccaggctaataatggt
taccctgagcatatgatttttgatccccagtatcctggttggtattatgatacaattgca
caagaatggcgctcattggagagctacaatgcagctactcaatcaacagtccaagctcat
gatctgcagaatcaagatgattatgcttcacgtggtacatatctgggagagaacaatagt
ctatctgggcagcctgatagtcgagcattagaaggccttggtaatcaagcccaacatgac
ggctggactgaatcttatggcaactatgatcagcagggcctgcacatgtggcaacctgag
actttgactaagactgaaactgctaatactacgactctttccaattttggaggaaatcat
cacgtgggaaatttttatggttcaaatagttccataattaaccatgttgaccaacagaga
tcttttaattcacggggggcagttcagtcttatgataaagctgctaaggctcatgttgag
gctaatgggattactgggatacaaagctttgtacccagtgttaactttagccaacagttt
aatccagctagtgtaaagcagagtgagcaaatgattttttcaaatgaattctacggcaat
caaaatcaagtaaatgttgcgcaacaatgctctgtaggaaactcaatttctgtcttgaat
ntaatggaggctgtcacggtaaatactaatgcttcagatgttggaggtggcacttgtgag
tacttccgttctttgtgccaacaatcatttccgggtccattggttggtggcaatgccgga
agcaaggaagtgaataagtggattgatgagagaattgcaaactgcgaatcttctgacata
gattataagaaacgggaagttatgaggttgctattctctttgcttaaaatagcatgtcag
cattatggaaagctccgatctccttttggcagtgactctacactgagggagagcgatacc
ccagaatcagcagttgctaaactatttgcatctgccaagaaggatggcagacaatataat
gcatacagtgctcttggccactgcttgcagcatttaccgtctgaagggcaaatgcgggca
actgctactgaagtccagaatcttctggtttctggtaggaaaaaggaggctctacaatgt
gcacaagaaggtcagttgtggggacctgcacttgtccttgcatcgcagcttggtgatcag
ttctatgtcgatactgtgaagcaaatggcacttcgccaactagtagcaggatcacctttg
cggacattatgcttgctaattgcagggcaaccagcagatgtgttttccacagacaatact
tctgatagcagttttcctgggcctatgaatgtttctcaacagcaagcacagtttgggact
actggcatgcttgatgattgggaagagaatttggctgttataactgccaacagaacaaaa
gatgatgaacttgtgattatccatcttggagattgtctgttgaaggaaagaagtgagata
tctgcagcccatatttgctatttagttgcagaagcaaactttgaggcatattcagatagt
gcaagactgtgtcttattggagcagatcactggaaatctccccgaacatatgctagtcct
gaggccatccaggttctcttttaaattgttttttctattccctattagagtcaattcatc
ctgctaccatttcagccatataagctcatatatgcttacatgcttgctgaagttggaaga
gtttctgacgcattaaagtactgtcaagcggtactaaaatctttgaaaactggtcgagca
cctgaagtagaatcatggagacagttggttttatctcttgaagagaggattcgaacccat
caacagggtggatatactgcaaatttagctccagcaaaattagttgggaaattgcttaac
ttttttgatagtacggcacatcgtgttgtgggagggttaccaccgccagtgcccacacat
ggaaacattcaagctaatgaacttcatgcccctagagtatcaagtagtcaatcgacaatg
accatgtcatccttaataccttctgcttccatggaacccataactgagtgggctgctgat
ggtaccaaaatgacattgcagaatagaagtgtttcagagccagattttggaagaactcca
agacaggttgattcatcaaaggaagcaacctcatccagtgcacaaggcaaagcacctgta
tctcggtttggccgttttggttttggttcacagcttttgcaaaagactgttgggctctta
aggcctcggtcagatcgacaggccaagttgggtgagacgaataaattctactatgatgaa
aaactaaaaagatgggttgaggaaggtgctgaacccccagctgaagaagcggccttgcca
ccaccacctacaacttctgccttccagaacggtttgtctgactacaatccaaagcctgca
acaaaaagtgagggctctcctactagtgggagcccaaagtttagcagtttaagtccaacc
gaatattcttcaggaatgccacctattccacgtagctcgaatcaattctcagctcgtggt
cggatgggtgttcgagctaggtatgttgacacctttaacaaaggtcatggaaactcggca
aacttgttccagtcaccttctgtaccatctgttaaacctgctgtttctgccaatacaaaa
ttctttgttccaaccgctgcaactacaagtgaacagccaatggaggctatagcagaaagt
gcacaagaagaaattggagctaacgagaaccctttgtcatccacagcgaatgatttgttc
cagactcccacatcatcatcggtggctatgcagagatttccgagcatggataatattgca
agtaagagggttgtgacaagtggaaatggcccttcggctcattcacgacgaacagcttca
tggagtggtggaaccttcaatacagcattaagttcaaatacagccgagccaaaatcttta
ggagaggcattgaggatgcctccatttatgcctagtgcaccaaatggtagcagcagcagc
tttggagatgaccttcatgaggtggaactttaa
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