Carica papaya (papaya): 110817710
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Entry
110817710 CDS
T05151
Name
(RefSeq) THO complex subunit 6 isoform X1
KO
K13175
THO complex subunit 6
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110817710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110817710
03041 Spliceosome [BR:
cpap03041
]
110817710
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110817710
Spliceosome [BR:
cpap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110817710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
110817710
NCBI-ProteinID:
XP_021902052
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MYGNATNWDEDAYRESILKEREIQTRTIFRTVWAPSQSPSPDYIVAASSDGTLTSYSMMS
LISKLDNFSYRSGQRLMVAEPEGFLKGHDGPAYDVKFYGDTEEALLLSCGDDGRIRGWKW
KEFIESEVPLCSQGNHVKPVLDLMNPQHKGPWGALSPIPENNAVAVNTQMGNIFSAAGDS
CAYCWDVEESKIKMVFKGHSDYLHCVLLVTLPIRLQKWEVY
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaatgcaactaactgggacgaagacgcatatagggagagcatactgaaggaa
agagagatacaaactcgaaccatattcaggaccgtatgggcgccatcccaaagtcctagt
cctgactacattgtcgccgcgtccagcgacggaaccctaacatcctactcgatgatgtct
ctcatctccaagttggacaattttagctacaggagcggtcagcgcttgatggtggccgaa
ccggaggggttccttaaaggccacgatgggcctgcttatgatgtcaagttctatggagac
actgaagaagctttgttgctcagttgtggagatgatggtcggattagaggatggaaatgg
aaggaatttattgaatcagaggtgcctctttgttcacaggggaatcatgtgaagcccgta
cttgacttgatgaatccccaacacaaaggtccctggggtgctctttctccaattccagaa
aataacgcagttgctgttaacactcagatgggaaacattttttcagctgctggtgactcc
tgtgcatattgctgggatgtggaggaaagtaagataaaaatggtttttaagggacattcc
gactacttacattgcgtattgctcgtaactctaccaatcagattgcaaaagtgggaagtg
tattaa
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integrated database retrieval system
