Carica papaya (papaya): 110817743
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Entry
110817743 CDS
T05151
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110817743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110817743
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110817743
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
110817743
NCBI-ProteinID:
XP_021902097
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MGMESDSKKTKDSFNSGDSTRSLPFPDEVLERVLSLLKTSKDRSSVSLVCKDWYNAERWS
RCHVFIGNCYSVSPEIVTRRFPNIRSVTLKGKPRFSDFNLVPDNWGADIQAWLVVFAAKY
PFLEELRLKRMTVTDESLEFLALSFPNFKALSLFSCDGFSTSGLAAIATHCKNLTELDIQ
ENGIDDRNGSWLSCFPENFTSLEVLNFANLTSDVNFDALERLVSRCKSMKVLKVNKSICL
EQLQRLLVFAPHLVELGTGSFSQELTIHQYADLESAFSNFKNMHTLSGLWEATAIYLPVL
YPACANLTFLNLSYAALQSDELANLLSHCPYLQRLWVLDTVEDKGLEAVGAYCPLLEELR
VFPADPFGEEIINGVTEAGFVTVSYGCPRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRL
CIMNPGQPDYTTNEPMDEAFGAVVKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVA
FAGSSDWGMQCVLEGCPKLRKLEIRDCPFGNAALLSGVEKYESMRFLWMSACNLTVNGCR
NLARKMPRLNVEVIKDNGSDDQAEKVYVYRSVAGPRRDAPPSVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggaatctgattctaagaaaacaaaggactcgttcaactcgggcgactcaacc
cggtcattgccattcccggatgaggtgctggagcgggtcctgtctctgttgaaaacgagt
aaggaccggagctctgtctcgctggtgtgcaaagactggtacaacgccgagcggtggtca
agatgccatgtgttcattggaaactgctactccgtgtcgcccgaaatcgtgactcgccgt
tttccgaatatacgtagcgtcacactcaaagggaagccgcgtttctcagacttcaacctg
gtgccggataactggggtgcggatattcaggcctggctcgtggtttttgcggccaagtat
ccttttcttgaggagctcaggcttaagagaatgactgtaactgatgagagcttggagttc
ttggctctctcgtttcccaacttcaaggctctttcgcttttcagctgtgatgggttcagt
actagtggtcttgctgccattgccactcattgcaagaacttgactgagctcgacatacag
gagaatggcattgatgacagaaatggaagttggctgagctgttttccagaaaacttcaca
tcattggaagtgctaaattttgctaacttgactagtgatgttaattttgatgcacttgaa
aggcttgtaagtaggtgcaaatcaatgaaggttttgaaggttaacaagagtatttgtttg
gaacaactacaaaggctgcttgtttttgctcctcacttagtggagcttggtactggttca
ttctcacaagagctcacaatacaccagtatgcagatcttgaaagtgccttcagtaatttc
aagaatatgcatacactttctggtctatgggaagctactgcaatatatcttccagttctt
taccctgcctgtgcaaatttgacatttttgaacttgagctatgctgcattgcagagtgat
gaacttgccaatcttctctctcactgtccgtatcttcagcgcctttgggtactagacaca
gtagaagataaagggctggaggctgtcggagcctactgtcctttgctcgaggaactccgt
gtattcccagctgacccctttggtgaagaaataatcaatggtgtaacagaagcagggttt
gttactgtgtcttatggctgcccaagactccactacgtcctctatttttgccgccagatg
actaatgctgctgttgctaccattgtgcagaactgccctgattttactcatttccgtcta
tgcataatgaacccaggtcaaccagattacacaacaaatgaacctatggatgaggcattt
ggtgctgtggttaagacctgtactaaacttcagaggctttcagtctcaggtctcttaact
gatctgacatttgagtatattgggaagtacgcgaaaaacttggaaaccctttcagttgca
tttgctggcagcagtgattggggaatgcaatgtgtgctagaaggttgcccaaaattaagg
aaactggagatcagggattgtccctttggaaatgcagcattactctctggtgtggagaag
tatgagtctatgaggttcctttggatgtcagcatgtaatttaactgtgaatggctgtaga
aacctggcaaggaagatgcccaggctaaatgttgaggtaataaaggataatgggagtgat
gatcaggcggaaaaagtgtatgtatatcgctctgttgcaggtccaaggagagatgctcca
ccctcagtgctcactctctga
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