KEGG   Carica papaya (papaya): 110817774
Entry
110817774         CDS       T05151                                 
Name
(RefSeq) protein RTF1 homolog
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpap03021]
    110817774
Transcription machinery [BR:cpap03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     110817774
SSDB
Motif
Pfam: Plus-3
Other DBs
NCBI-GeneID: 110817774
NCBI-ProteinID: XP_021902140
LinkDB
Position
Unknown
AA seq 665 aa
MADLENLLLEAAGRTNAGGRNRNSHPSSRRQREGSYSDGGSDSRDDSDDDRAYANRKPSG
SQVPLKKRLDPPEREDDHGSQEEGGYDHGGSGHEDESSDESDFGDDLYKNEEDRQKLAGM
TEFQREMILAERADKKGDKNFTEKFRSKRENERSTRSTKDTPPLSSSRGVRSSARSADRA
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGSSPVKRKPFTSTSLSSSSQSES
ESRSRSEDEGSTGDGGMIDSDDDRMMPGSEGPKFEDIKEITIRRSKLAKWFMEPFFEELI
VGCFVRVGIGRSRSGPIYRLCIVRNVDATDPDRTYKLENKTTYKYLNCIWGNDSSAARWQ
MAMVSDSAPLEEEFKQWIREVERSGGRMLSKQDVLDKKEAIKKINTFVYSAATVKQMLKE
KKSASIRPLNIAAEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEASRQSQGKDAKALRL
AEMNRKNRVENFKNASELKPVNTSLKAGEAGYDPLSRRWTRSRNYYAAKPGGQEGNLEAN
VDANSALAGSESNGAGSGPGATVASVTGIAATAAALQAAAGAGKLVDTSAPVDQGTESNL
LHDFELPISLSMLQKYGGPHGAHKGFMARKQMIEATVGCCVPENDGRRHGLTLTVSDYKR
RRGLL
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggctgatttggaaaatttgcttctggaggcagcaggaagaaccaatgctggaggcaga
aaccggaactctcatccatcatctcgaaggcaacgtgagggttcatattctgatggtgga
agcgattcgagggatgattctgatgatgatcgtgcttatgcaaacaggaaaccttctgga
tctcaagttcctttaaagaagaggttggaccccccagagagagaggatgatcatggaagc
caggaagaaggtggttatgatcatggtggttctggtcatgaggatgagagcagcgatgaa
tctgattttggtgatgatctttataagaatgaagaagaccggcaaaagcttgccgggatg
actgaatttcaaagagagatgatattggcagaacgtgctgataagaagggtgataagaat
tttacggagaaatttaggtcaaagagagaaaatgagaggagcacacgctccacaaaagac
actcctcctctatcatcctctcggggtgtgaggtcatctgctagatctgcagacagggca
gctgccaaggatgatgcgctgaatgagctgagagcaaaacggttgaagcagcaggaccca
gaagcccaccgtaaattgagggatgcatctaggggaagttcaggcaataggggctcgtca
cctgtcaagcggaaacccttcacttcaacaagcttgagtagctccagtcaaagtgaaagt
gaaagtaggtctcgcagtgaagatgaagggtcaactggggatggtggaatgatagacagc
gatgatgacagaatgatgcctgggtcagagggaccaaaatttgaggatattaaggaaatt
acaatcaggaggtcaaaacttgcaaaatggtttatggagcctttcttcgaggagctgatt
gtaggatgctttgtgagggttggcattgggaggtcaaggagtgggcccatctacaggctt
tgcatagtgcggaatgttgatgctacggatcctgacaggacatacaagctagaaaataag
acaacatataaatatctgaattgcatttggggcaatgacagctctgctgccaggtggcag
atggccatggtttctgactctgcaccgctagaggaggagtttaaacagtggattagggag
gttgaacgaagtggggggcggatgctgagcaaacaagatgtgttggacaagaaagaggcc
attaaaaaaatcaacacatttgtctactctgctgcaactgtgaagcagatgttgaaagag
aaaaaatcagcctcgataaggccattaaatattgcagctgagaaggatcggcttaggagg
gagttggaagttgcacagagcaagcatgacgatgcagaggtggagagaatcaagacaaga
ctgcagcaactagaggcatcgaggcagtcgcaggggaaggatgccaaggctcttaggcta
gctgagatgaacagaaagaacagagtggagaattttaaaaatgcatcagaacttaaacct
gttaatacaagtttaaaagctggggaggctggatatgatccattatcaaggaggtggact
cgatcaagaaactattatgctgcaaaacctggtggacaagagggtaatttagaagcaaat
gttgatgcaaatagtgcattggcaggttcagagagtaatggagcaggatcaggaccagga
gccacagtagcatctgttactggcattgcagctacggctgcagcactacaagctgctgct
ggtgctgggaagctggttgacacaagcgctcccgtggatcaaggaacagaatcgaatctt
ctgcatgactttgagcttccgatatcattgtctatgcttcaaaagtatggcggaccccat
ggagctcataaaggattcatggcaaggaagcaaatgatagaagcaacagtcggatgctgt
gtgccagagaatgatgggaggaggcatggtttgaccttgacagttagtgactacaagaga
agaagagggcttctttga

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