Carica papaya (papaya): 110817774
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Entry
110817774 CDS
T05151
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110817774
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
110817774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
110817774
NCBI-ProteinID:
XP_021902140
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MADLENLLLEAAGRTNAGGRNRNSHPSSRRQREGSYSDGGSDSRDDSDDDRAYANRKPSG
SQVPLKKRLDPPEREDDHGSQEEGGYDHGGSGHEDESSDESDFGDDLYKNEEDRQKLAGM
TEFQREMILAERADKKGDKNFTEKFRSKRENERSTRSTKDTPPLSSSRGVRSSARSADRA
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGSSPVKRKPFTSTSLSSSSQSES
ESRSRSEDEGSTGDGGMIDSDDDRMMPGSEGPKFEDIKEITIRRSKLAKWFMEPFFEELI
VGCFVRVGIGRSRSGPIYRLCIVRNVDATDPDRTYKLENKTTYKYLNCIWGNDSSAARWQ
MAMVSDSAPLEEEFKQWIREVERSGGRMLSKQDVLDKKEAIKKINTFVYSAATVKQMLKE
KKSASIRPLNIAAEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEASRQSQGKDAKALRL
AEMNRKNRVENFKNASELKPVNTSLKAGEAGYDPLSRRWTRSRNYYAAKPGGQEGNLEAN
VDANSALAGSESNGAGSGPGATVASVTGIAATAAALQAAAGAGKLVDTSAPVDQGTESNL
LHDFELPISLSMLQKYGGPHGAHKGFMARKQMIEATVGCCVPENDGRRHGLTLTVSDYKR
RRGLL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttggaaaatttgcttctggaggcagcaggaagaaccaatgctggaggcaga
aaccggaactctcatccatcatctcgaaggcaacgtgagggttcatattctgatggtgga
agcgattcgagggatgattctgatgatgatcgtgcttatgcaaacaggaaaccttctgga
tctcaagttcctttaaagaagaggttggaccccccagagagagaggatgatcatggaagc
caggaagaaggtggttatgatcatggtggttctggtcatgaggatgagagcagcgatgaa
tctgattttggtgatgatctttataagaatgaagaagaccggcaaaagcttgccgggatg
actgaatttcaaagagagatgatattggcagaacgtgctgataagaagggtgataagaat
tttacggagaaatttaggtcaaagagagaaaatgagaggagcacacgctccacaaaagac
actcctcctctatcatcctctcggggtgtgaggtcatctgctagatctgcagacagggca
gctgccaaggatgatgcgctgaatgagctgagagcaaaacggttgaagcagcaggaccca
gaagcccaccgtaaattgagggatgcatctaggggaagttcaggcaataggggctcgtca
cctgtcaagcggaaacccttcacttcaacaagcttgagtagctccagtcaaagtgaaagt
gaaagtaggtctcgcagtgaagatgaagggtcaactggggatggtggaatgatagacagc
gatgatgacagaatgatgcctgggtcagagggaccaaaatttgaggatattaaggaaatt
acaatcaggaggtcaaaacttgcaaaatggtttatggagcctttcttcgaggagctgatt
gtaggatgctttgtgagggttggcattgggaggtcaaggagtgggcccatctacaggctt
tgcatagtgcggaatgttgatgctacggatcctgacaggacatacaagctagaaaataag
acaacatataaatatctgaattgcatttggggcaatgacagctctgctgccaggtggcag
atggccatggtttctgactctgcaccgctagaggaggagtttaaacagtggattagggag
gttgaacgaagtggggggcggatgctgagcaaacaagatgtgttggacaagaaagaggcc
attaaaaaaatcaacacatttgtctactctgctgcaactgtgaagcagatgttgaaagag
aaaaaatcagcctcgataaggccattaaatattgcagctgagaaggatcggcttaggagg
gagttggaagttgcacagagcaagcatgacgatgcagaggtggagagaatcaagacaaga
ctgcagcaactagaggcatcgaggcagtcgcaggggaaggatgccaaggctcttaggcta
gctgagatgaacagaaagaacagagtggagaattttaaaaatgcatcagaacttaaacct
gttaatacaagtttaaaagctggggaggctggatatgatccattatcaaggaggtggact
cgatcaagaaactattatgctgcaaaacctggtggacaagagggtaatttagaagcaaat
gttgatgcaaatagtgcattggcaggttcagagagtaatggagcaggatcaggaccagga
gccacagtagcatctgttactggcattgcagctacggctgcagcactacaagctgctgct
ggtgctgggaagctggttgacacaagcgctcccgtggatcaaggaacagaatcgaatctt
ctgcatgactttgagcttccgatatcattgtctatgcttcaaaagtatggcggaccccat
ggagctcataaaggattcatggcaaggaagcaaatgatagaagcaacagtcggatgctgt
gtgccagagaatgatgggaggaggcatggtttgaccttgacagttagtgactacaagaga
agaagagggcttctttga
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