KEGG   Carica papaya (papaya): 110817786
Entry
110817786         CDS       T05151                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03020  RNA polymerase
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110817786
  09124 Replication and repair
   03420 Nucleotide excision repair
    110817786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpap03021]
    110817786
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110817786
Transcription machinery [BR:cpap03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110817786
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110817786
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 110817786
NCBI-ProteinID: XP_021902157
LinkDB
Position
Unknown
AA seq 219 aa
MSEKGGKGFSLPSKGAKSSLKGKDDSSAKSKRGRKVHFNAEGLSEPNLSSPLSSDGKFQG
LGGNGDRIKVGKGDKSVKGGKISAVKEPQPLELKIGAELPENAKCLMDCEAALILEGIQD
QMVVLSRDPTIKIPVSFDKGLQYAKSKNNFTDPQPVRKLLETLTNYGVTDGEICVIANAH
PETIDEVFALVPSLKDKRSSISKPLEGILSGLANLRNSS
NT seq 660 nt   +upstreamnt  +downstreamnt
atgtcggagaaaggaggaaaaggtttttcactaccatctaaaggagccaaatcatcattg
aaagggaaggatgatagttcggctaagtcaaagaggggaaggaaagttcacttcaatgct
gagggtttgtccgagcccaatttgagttctccgttaagttctgatggaaagtttcaaggt
ctaggtggtaatggtgataggatcaaagtcggaaaaggagacaaatccgtaaaaggagga
aaaatttctgcagtgaaggaaccccagccactagagctcaaaattggggcagaacttcca
gaaaatgctaagtgcctgatggactgtgaggctgcattaatcttagaaggaatccaggac
cagatggttgtgttatctagagatccaacaattaaaatccctgtatcatttgacaaagga
ctgcagtatgcaaaaagcaaaaacaattttacggaccctcagcccgttagaaagcttctc
gagactctgacaaattatggtgtcactgatggtgagatatgtgtgattgccaatgcgcat
ccagaaactattgatgaggttttcgctcttgttccatccctgaaggataaaagaagctcc
atcagcaaacccctcgaagggatactaagtgggttagctaatctccgaaattccagttga

DBGET integrated database retrieval system