Carica papaya (papaya): 110817857
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Entry
110817857 CDS
T05151
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpap01009
]
110817857
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110817857
Enzymes [BR:
cpap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110817857
Protein phosphatases and associated proteins [BR:
cpap01009
]
HAD phosphatases
Fcp/Scp phosphatases
110817857
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110817857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
110817857
NCBI-ProteinID:
XP_021902266
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MSLFKTVVYEGEERLGDVEIYPQEQRRQQYEEEEEEEEMNKKRKIIDEVVMKDIRISHFS
QPSERCPPLAVLHTITSCGVCFKMESKSSLSQDSPLHLLHSSCIRDNKTAVMVFGNEELH
LVAMYSRNNERNYPCFWGFNVAFGLYDACLVMLNLRCLGIVFDLDETLIVANTMRSFEDR
IEALQRKISTEVDPQRLTCMVAEVKRYQDDKNILKQYVESDQVVENGKVIKVQSEVVPAL
SDNHQPIVRPLIRLQERNIILTRINPQVCICKTGSRKSLFNVFQDGICHPKMALVIDDRL
KVWDEKDQPRVHVVPAFAPYYAPLAEANNTIPVLCVARNVACNVRGGFFKEFDDGLLQRM
PEISYEDDIKSIPSPPDVSNYLVSEDDSSVSNGNKDPLAFDGMADAEVERRLKEAISAST
AASPVVTNLDPRLASSLQYTMGSSSSSVPLPTVQQSVMPFHGRQFPGTASAVKPVVPVSP
LESSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHAPTETPFPGRPPIQAPISR
GQSRGGWFPVEEEMTPQLLNRVVTKDFPLDSXXXXXXXHRVHHPSFLPKVESSISSDRIL
HENQRLPKEPLHRDDRMRLNNSLSSYHSFSGEDMPLSRSSSRNRDLDFESGRVVSSAETP
AGVLQDIAIKCGTKVEFRPALVPSKELKFSIEVWFAGEKIGEGVGRTRREAQHQAAEGSI
KNLANIYISRMKPDAGSAHGDASSFTNTNDNGFLGNANSVGNLLFPREESTIFSTTSEQS
RLVDPRLETSRRSIGAVSALRELCMMEGLGVVFQPLPPSANAIQTNEVQAQVEIDGQVLG
EGIGSTWDEAKMQAAERALGSLRSMLGQFPRKRQGSPRSLQGMSSKRLKQEFPRVLQRVP
SSGRFSKNAPPVP
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtttaaaacggtagtgtatgaaggggaggagagactgggagatgtggagata
tacccacaagaacagcgacgacaacaatatgaagaagaagaagaagaagaagagatgaac
aagaagaggaaaatcatcgatgaggtggtgatgaaagatatcaggataagtcacttctcg
caaccaagtgagaggtgtccgccacttgcagttcttcataccattacttcttgtggagtt
tgcttcaaaatggaatcaaaatcttcgctctctcaagactctccgctccacctattgcac
tcctcctgtatcagagacaacaagactgcagttatggttttcggaaatgaggagcttcat
ctagtcgcaatgtattctaggaataacgagagaaattatccatgtttctggggattcaat
gttgcttttgggctttatgacgcgtgtcttgtcatgctgaatcttagatgtcttggtatt
gtctttgatttggatgaaactctcatagttgcgaatacaatgcgctcatttgaggatagg
attgaggctttgcaacggaagattagcactgaggtggacccacagcgtcttacgtgtatg
gtggcagaggtcaaacgttaccaagatgacaaaaatatattgaagcaatatgtggaaagt
gatcaggttgtcgaaaatggaaaggtgatcaaagttcaatctgaagttgttcctgctttg
tctgacaaccatcagcctattgtccgcccactaataaggttacaggagagaaacattatt
ctgactcggatcaacccacaggtttgtatctgtaaaacaggttcaagaaagtcattattc
aacgtcttccaagatggaatatgtcaccccaagatggcattggtgatagatgatcgctta
aaagtatgggacgagaaggaccaacctcgggtccatgttgtccctgcattcgctccctac
tatgctccattagctgaagcaaataatactatacctgtactctgtgtggcaagaaatgtt
gcttgcaatgttagaggtggttttttcaaagaatttgatgatggtcttctacaaaggatg
ccagaaatatcatatgaagatgatattaaaagtattccttctccacctgatgttagcaat
tatttggtctctgaggatgattcttctgtttcaaatgggaataaggatccacttgctttt
gatgggatggcagatgctgaggttgagagaagactaaaggaggcaatttcagcatccaca
gcagcttctcctgtggtaactaatctagatccaaggcttgcttcttctcttcaatataca
atggggtcttcttctagctcagttccactgccaacagttcaacaatcagttatgcccttt
catggtaggcaatttcctgggacagcctcagcagttaaacctgtggttcctgttagcccc
ttggaatcgagcttgcaaagttctcctgccagagaagagggtgaggttccggaatcagaa
ttagatccagatacaaggaggaggcttctcatattgcagcatggtcaagatacaagagat
catgcaccaactgaaacgccatttcctggaagacctccaatacaagccccaatttcacgt
gggcaatcacgtggaggctggtttccagttgaggaggagatgactcctcaactgttgaac
cgagtagttacaaaagattttcctttggactcnnnnnnnnnnnnnnnnnnnnagcaccga
gttcatcatccttcatttttgcccaaggttgagagttctatttcatctgatagaattctt
catgaaaatcaaagattgccaaaagagccacttcatagagatgatcggatgaggttaaac
aattcactatctagttatcattccttctcaggtgaggatatgcccctgagtcgatcttct
tcaaggaacagggatcttgactttgaatctggacgagttgtttcaagtgcagaaactcct
gctggagttctacaggatattgcaattaaatgtggtacaaaggtggagttcaggccagct
ttagttccgagcaaagaactgaaattctccattgaggtttggttcgctggagaaaaaatt
ggtgaaggagttggtaggacaagaagagaggcccaacatcaggctgctgagggttctatt
aaaaacttagccaatatatatatttctcgtatgaagcctgatgctgggtctgcacatggg
gatgctagttcctttaccaacacaaatgataatggctttctgggtaatgcaaattctgtt
gggaatctactttttcccagagaagagtctacaatattttcaactacatcagagcaatct
aggcttgtggacccaaggctggaaacctctagaagatctataggtgcagtttcggcactt
agagaattgtgcatgatggagggccttggggtagttttccaaccactgccaccatcagct
aatgcaatccagacaaatgaagtacaggcacaggttgaaatagatggacaggttttaggg
gaagggattgggtcgacttgggatgaggctaagatgcaggctgctgagagagctcttgga
agcctgagatcaatgcttggtcagtttcctcggaaacgtcagggttccccgaggtcattg
caagggatgtcaagtaaacgactaaagcaagagttcccgagagttttgcagcgggtacca
tcttctgggcgattttctaaaaatgctccacctgttccctga
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