Carica papaya (papaya): 110818035
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Entry
110818035 CDS
T05151
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110818035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110818035
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
RNases
110818035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Ferritin
MCM4_WHD
Cob_adeno_trans
THP2
HTH_CHD6-9
Motif
Other DBs
NCBI-GeneID:
110818035
NCBI-ProteinID:
XP_021902467
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MELLKDLPFPITYYTLTAKELEDNGYCRNQSNCLSTMPAPSGSLNEILALDCEMCITTEG
FELTRLTLVDIKGQVVLDKLVKPSNSIIDYNTRFSGITSEMLDGVTTSLQDIQEEFLKLV
NKETILVGHSLENDLSALKIFHELVIDTAVLYKHPRGGSHKTALRVLAKRFLCKEIQQSG
SGHDSIEDARAAMELALLKIKNGPDFGSPPSFTRRKLLSVLNDFGKMSSFIDDVSIVKRY
AGELSHAIPVSSDDEALSRAKIEAKSQRAQFVWTQFSELNSYFKKQAEDMEKLNEKLARM
ISELTCSKKPANRRGNKYNIPAELKEILTRLNARVCSLYDALPTNAMLIICTGHGDTATV
HRIRKMLREQSETSMCREKIVKVLEELQAQAEVALCFVSVKQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaactcctgaaggatcttccatttcccattacatattacacacttacagcaaaagaa
ttggaagacaatggatattgtcgcaatcaatcaaattgtctttctactatgcctgctcct
tcaggttctctcaatgaaatattggctcttgattgcgagatgtgtatcacaactgagggc
ttcgagttgacgagactcacattagtggatataaaaggacaggttgtgttggataaattg
gtaaaaccttcaaactccatcattgattacaatacaaggtttagcggaatcacatcagag
atgttagatggggtgacaacaagtcttcaagatattcaggaagagttcttaaagctggta
aacaaagagaccatcttagttgggcattccttggagaatgatctgtcagcattgaaaatc
tttcatgagttggtaattgatactgctgtattatacaagcatccccgtggagggtctcat
aaaactgctcttcgagttctggccaagagatttctttgtaaggagatacagcagtcaggg
tctggacacgacagcattgaggatgcaagagctgcaatggagttagcactattaaagatt
aaaaatggccctgatttcggttcacctccatcatttacgcggaggaagctcctctcagtt
ttgaatgactttggaaaaatgtcttctttcattgatgatgtatccattgtgaagcggtat
gctggtgaattatcccatgcaattcctgtgtcatctgatgatgaagctctttccagggcc
aaaattgaggcgaagagtcagcgggcacagtttgtctggacccaattttcagaattgaat
tcttatttcaagaaacaagcagaggacatggagaagttgaatgaaaaacttgctaggatg
atatcggaacttacatgcagtaagaaacctgccaacagaagaggcaacaaatataacatt
cccgctgaactaaaggagatccttactcgcttgaatgctagggtttgtagtctctacgat
gcactaccaactaatgccatgcttattatctgcaccgggcatggcgacacagccactgtt
cataggataaggaaaatgctgagagagcaaagtgaaactagcatgtgccgtgagaaaatc
gtaaaggtcttggaagagcttcaggcccaagctgaagtagctttgtgttttgtaagtgtt
aagcaataa
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