Carica papaya (papaya): 110818050
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Entry
110818050 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110818050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110818050
03036 Chromosome and associated proteins [BR:
cpap03036
]
110818050
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110818050
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110818050
PBAF complex
110818050
GBAF(ncBAF) complex
110818050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110818050
NCBI-ProteinID:
XP_021902488
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MATKSSLKEPAGPGIPPDTPSKSPQVSPTPIKTETATSAPAASRPLSLPPPPPPFSEADS
VHVPSYSRWFSWNTIHECEVRLLPEFFESRSHSKTPKVYMYYRNSIVKQFRDNPPRKITF
TDVRRTLVGDVGSIRRVFDFLEAWGLINYSPSALTKPLKWDDKDAKSPADASLQSPPTII
KDTAKRICSGCKSICNIACFYCEKYDLTLCARCYVXGNYGRGVHPHSSEFKRVEISEQTK
ADWTDKETLQLLEAIMHYGDDWRKVAQHVSGRSEKDCITHFIKLPFGEEFISCADSGEVD
DRFNEMKDPADTESGYEGIGTTPSTKRMRLTPLADASNPIMTQVAFLSALAGVDVAKSAA
RASVTALSEVDSRAGKEADAASGRGTTENELEKTSLDAVSALDKEELEIERAISEIAEVK
LKEIRDKIVQFEELDLHMEQERQQLEQIKNMLFVDQLNVLLNRSSAQNQGNA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaaatcgtcgttgaaagaaccagccggacctggaattcctcccgacacaccc
tctaaatccccccaagtgtcaccaacccctatcaaaaccgaaactgccacctctgcgcct
gctgcttcccgcccgctgtctctgcctccgcctccgccgcccttctccgaagccgactct
gtccatgtccccagctactctagatggttctcgtggaacaccatacacgaatgtgaggtc
cggttgctgccggagttcttcgaatctcggtctcattcgaaaaccccaaaagtttacatg
tactacaggaactccattgttaagcaattcagagataatcctccaaggaagatcaccttt
actgatgttaggaggaccctcgtaggcgacgtcggttccatccgcagggtctttgatttc
ctcgaggcatggggcctcatcaattattccccatccgctctgaccaagcccttgaagtgg
gacgataaggacgccaagtcccctgctgacgcctccctccagtctcctcccaccattatt
aaagacactgccaagagaatctgcagtggttgcaagtctatttgcaacattgcctgcttt
tattgcgaaaagtatgacttgactctttgtgcaaggtgctatgttnggggcaactatggg
cgtggtgttcatcctcattcttcagaattcaagagagtcgagatcagtgaacagacaaag
gcagattggacagacaaagaaactctacaactcctggaagccattatgcactatggtgat
gactggaggaaggttgcccagcatgtaagtggaagaagtgagaaggattgcatcactcat
ttcataaaacttccttttggggaggaatttatcagttgcgcagactctggggaggttgat
gataggtttaacgaaatgaaagatcctgctgacactgagtcaggatatgaaggtattggc
acaacaccctctaccaaaagaatgcgtctgacgcctcttgcagatgcaagcaacccaata
atgactcaggtagcttttctgtctgccttggccggtgtagatgttgcaaaatctgctgct
cgagcatctgtgacagctttatccgaggtggactcccgtgctggtaaagaagctgatgct
gcatctggcaggggaactacagaaaatgagttggaaaaaacaagtttagatgcagtttca
gcacttgataaggaagagctggagatagaaagagcaatttctgagattgcagaagttaag
cttaaagagatccgtgataaaattgttcagttcgaggaactggatttacacatggagcaa
gagcggcaacagctggagcaaattaaaaatatgctttttgtagatcagctgaatgttcta
ctaaatagaagttctgcccaaaaccagggcaacgcgtag
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