Carica papaya (papaya): 110818172
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Entry
110818172 CDS
T05151
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110818172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110818172
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110818172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_Zer-1
Nudix_N
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110818172
NCBI-ProteinID:
XP_021902632
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MGGEPKVSTVDLNLCFERLMMVGGAIDGLGVEKMKMEGVVITEWKDIPMELLLRIISLVD
DRTVIMASGVCSGWRDAISFGLTHLSLSWCKNNMNNLVLSLVPRFTKLQTLILRQDKPQI
EDIAIETIANHCHDLHDLDLSKSFKLSDRALCALAHGCPNLTKLNISGCTAFSDNALAYL
TGFCRKLKVLNLCGCVKAASDTALQAIGCNCNQLQSLNLGWCENVSDLGVMTLAYGCPDL
RNVDLCGCVCITDESVVALANRCLHLASLGLYYCRNITDRAIYELIYSLARNGVKKPGIW
KSMKGRFEEEGLRSLNISQCTALTPPAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHC
ACAFQAHRTASNIPHPAH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagaacctaaagtcagtaccgtggacttgaacttgtgcttcgagaggttgatg
atggttggcggtgctattgacgggcttggagttgagaaaatgaagatggagggcgtcgtg
atcactgagtggaaggatatcccgatggagctgttgttgagaatcatttcgcttgttgat
gatcggacagtaatcatggcttctggcgtctgtagtgggtggagggatgccatttccttt
ggcctgacccatctgtctctctcctggtgcaaaaacaacatgaacaacttagttctatct
cttgttcctagattcaccaaattgcaaacgctgatactgcggcaagataaaccacaaatt
gaggatattgctattgagacaatagcaaatcattgtcatgatctccatgacctggaccta
agcaagagcttcaagctaagtgatcgcgctctttgtgcgttggcccatggttgccctaac
ctcactaaactcaacatcagtggctgtaccgcattcagtgataatgctcttgcatacttg
acagggttttgccggaaactaaaagttttaaatctttgtggatgtgtaaaagctgcatct
gacactgcactgcaggctattggatgcaactgcaaccaattacagtctttgaatctgggt
tggtgtgaaaatgtgagtgacttaggagttatgactttagcatatggatgccctgatctc
cggaatgtcgacttgtgtggctgtgtctgcataacagatgaaagtgtggttgctttggca
aacaggtgtctccatctggcatcccttgggctatactattgcagaaatatcacagacaga
gcaatatatgaactcatatattcactagcccggaacggagtgaagaaaccagggatttgg
aagtccatgaaaggaaggtttgaggaagaagggttgaggagtctgaatatcagccagtgc
acagcgctcaccccacctgctgttcaggcactttgtgatacatttcccgcacttcatacc
tgctccgggaggcattcgttggtcatgagtggctgtctgaatctaacatccgtacattgt
gcctgtgcgttccaagcacaccgcacagccagcaacattcctcatccagctcattaa
DBGET
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