KEGG   Carica papaya (papaya): 110818469
Entry
110818469         CDS       T05151                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110818469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110818469
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110818469
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110818469
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 110818469
NCBI-ProteinID: XP_021903061
LinkDB
Position
Unknown
AA seq 107 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELAQKAEREATDLKGSMRKRMEFLDLD
NT seq 324 nt   +upstreamnt  +downstreamnt
atgtcttgggctggacccgaagatatctacctatctacttctctggccagttatcttgac
aagaagcttcttgtactacttagagacggtcgaaagcttatgggcactcttcgttctttt
gatcaatttgccaatgctgttctcgagggtgcgtgtgagagagtgattgttggtgatctt
tactgcgacatccctttaggtctctatgtcatccgtggggagaatgttgttttaattggc
gagctggcgcagaaggctgagagagaagctactgatcttaaaggctcaatgaggaaaaga
atggagtttcttgatttggactaa

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