Carica papaya (papaya): 110818469
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Entry
110818469 CDS
T05151
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110818469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110818469
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110818469
mRNA degradation factors
5'-3' decay
Lsm complex
110818469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110818469
NCBI-ProteinID:
XP_021903061
LinkDB
All DBs
Position
Unknown
AA seq
107 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELAQKAEREATDLKGSMRKRMEFLDLD
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggacccgaagatatctacctatctacttctctggccagttatcttgac
aagaagcttcttgtactacttagagacggtcgaaagcttatgggcactcttcgttctttt
gatcaatttgccaatgctgttctcgagggtgcgtgtgagagagtgattgttggtgatctt
tactgcgacatccctttaggtctctatgtcatccgtggggagaatgttgttttaattggc
gagctggcgcagaaggctgagagagaagctactgatcttaaaggctcaatgaggaaaaga
atggagtttcttgatttggactaa
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integrated database retrieval system