Carica papaya (papaya): 110818608
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Entry
110818608 CDS
T05151
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110818608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110818608
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110818608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
110818608
NCBI-ProteinID:
XP_021903221
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MGSKATFSDKKSSRVPSSISKPDIVTSKSSTKDSSSGLMQKDRCGSVDENTQFNEGSCNT
ESREMLKSSVPYMSKRRDNVLHDSSSSSLSQGDPENLVSNLKNIPSASKFGNSNNLKAKQ
VNPQAQYKPETWMLAEKAEKTQLNLAVVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKE
AKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKKYHVVLLDSPGHKDFVPNMISG
ATQADAAILVIDASNGAFEAGMDGMKGQTREHAQLIRSFGVDQVIVAVNKMDSVGYSKDR
FNLIKLQLGTFLRTCGFKDSFISWIPLSVMENQNLVAVPTDVRLSSWYSGPYLLDAIDSL
PSPTRDFSKPLLMPICDVIKLSPQNQVSACGKLEAGALRSGSKVLILPSAQVGTVRSLEQ
DSRHCTVARAGDNVAVSLHGIDANHVMAGGVLCHPDFPVAVAEHLELKVLVLDGAAPLLI
GSQLEFHIHHANEAARVAKILSILDPKTGKVIKKAPRCLIAKQSAVLEVVLQAPVCVEEF
SKNRALGRVFLRALGRTVAVGIVTRIIEEVQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaaagctactttttctgataaaaaatcttcaagagttccctcaagcatttcg
aaaccggatattgtcacttcaaaatcaagtactaaagatagttcttcaggtttaatgcaa
aaagacagatgtggaagtgtggatgagaatactcagttcaatgaaggttcatgtaataca
gaatcgagggaaatgttaaagagctcagttccatatatgtcaaaaaggagagacaatgta
ttgcatgatagcagttcctcttcgttaagtcagggtgaccctgaaaatcttgttagtaat
ctgaaaaacattccttcagccagtaaatttggaaattcaaataacttgaaagctaaacaa
gtaaatccacaagctcagtataagcctgaaacatggatgctcgcggagaaagcagagaaa
actcagctgaatcttgcagttgttggtcatgttgattctggaaaatcaacactctcaggt
agacttttgcatcttttgggacgaatatctcagaaggaaatgcataaatatgaaaaagaa
gccaaattacagggaaaagggtcctttgcttatgcatgggcattggatgagagtgctgaa
gagagagaaagaggaatcactatgaccgtggctgttgcatattttgattccaaaaaatat
catgttgttctgcttgattctcctggacataaggattttgttccaaacatgatatctgga
gcaacacaagctgatgctgcaattcttgtgatagatgcctctaatggggcatttgaggct
ggtatggatggtatgaagggtcaaacaagggagcatgcacaacttatcagaagttttggt
gttgatcaggtcatagttgcagtcaacaaaatggactctgtgggatactctaaggatcgt
tttaatttgattaaactgcaactcggaacatttctccgcacttgtggttttaaagattcc
tttatatcatggattccactaagtgtcatggaaaatcaaaatctggtagcagtccctact
gatgttcggttgtcgtcatggtactctggtccttacttgctggatgcaattgattctctc
ccgtctcctactagagacttctcaaagcctctactaatgcccatatgtgatgtcataaaa
ttgtcccctcaaaatcaggtgtctgcttgtggaaaattggaggctggagctcttcgaagt
ggatctaaggtcttaattttgccgtctgcacaagtagggacagtgcgctcattagagcaa
gactcccgtcattgcacagttgcacgagctggggacaatgtagccgtcagtctacatggc
attgatgcaaaccatgtaatggctggaggtgtgctatgtcatcctgatttcccagttgca
gttgctgaacatttagaattgaaggtgcttgtcttggatggtgcagcccctctcctgatt
ggttctcagttggagtttcacatacaccatgcaaacgaagctgccagagttgcaaaaata
ttatcgatacttgatccaaagactggcaaggttattaagaaggctcctcggtgtctcatt
gctaagcagagtgcagtgcttgaggtggttctgcaggctcctgtttgcgtggaagagttc
tcaaaaaacagagctcttgggagagtgtttttaagagctctaggaagaacagttgccgtg
ggaattgtgactcgaataatagaggaagtacaatag
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