KEGG   Carica papaya (papaya): 110818608
Entry
110818608         CDS       T05151                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110818608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110818608
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110818608
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Mg_chelatase
Other DBs
NCBI-GeneID: 110818608
NCBI-ProteinID: XP_021903221
LinkDB
Position
Unknown
AA seq 571 aa
MGSKATFSDKKSSRVPSSISKPDIVTSKSSTKDSSSGLMQKDRCGSVDENTQFNEGSCNT
ESREMLKSSVPYMSKRRDNVLHDSSSSSLSQGDPENLVSNLKNIPSASKFGNSNNLKAKQ
VNPQAQYKPETWMLAEKAEKTQLNLAVVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKE
AKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKKYHVVLLDSPGHKDFVPNMISG
ATQADAAILVIDASNGAFEAGMDGMKGQTREHAQLIRSFGVDQVIVAVNKMDSVGYSKDR
FNLIKLQLGTFLRTCGFKDSFISWIPLSVMENQNLVAVPTDVRLSSWYSGPYLLDAIDSL
PSPTRDFSKPLLMPICDVIKLSPQNQVSACGKLEAGALRSGSKVLILPSAQVGTVRSLEQ
DSRHCTVARAGDNVAVSLHGIDANHVMAGGVLCHPDFPVAVAEHLELKVLVLDGAAPLLI
GSQLEFHIHHANEAARVAKILSILDPKTGKVIKKAPRCLIAKQSAVLEVVLQAPVCVEEF
SKNRALGRVFLRALGRTVAVGIVTRIIEEVQ
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgggttcaaaagctactttttctgataaaaaatcttcaagagttccctcaagcatttcg
aaaccggatattgtcacttcaaaatcaagtactaaagatagttcttcaggtttaatgcaa
aaagacagatgtggaagtgtggatgagaatactcagttcaatgaaggttcatgtaataca
gaatcgagggaaatgttaaagagctcagttccatatatgtcaaaaaggagagacaatgta
ttgcatgatagcagttcctcttcgttaagtcagggtgaccctgaaaatcttgttagtaat
ctgaaaaacattccttcagccagtaaatttggaaattcaaataacttgaaagctaaacaa
gtaaatccacaagctcagtataagcctgaaacatggatgctcgcggagaaagcagagaaa
actcagctgaatcttgcagttgttggtcatgttgattctggaaaatcaacactctcaggt
agacttttgcatcttttgggacgaatatctcagaaggaaatgcataaatatgaaaaagaa
gccaaattacagggaaaagggtcctttgcttatgcatgggcattggatgagagtgctgaa
gagagagaaagaggaatcactatgaccgtggctgttgcatattttgattccaaaaaatat
catgttgttctgcttgattctcctggacataaggattttgttccaaacatgatatctgga
gcaacacaagctgatgctgcaattcttgtgatagatgcctctaatggggcatttgaggct
ggtatggatggtatgaagggtcaaacaagggagcatgcacaacttatcagaagttttggt
gttgatcaggtcatagttgcagtcaacaaaatggactctgtgggatactctaaggatcgt
tttaatttgattaaactgcaactcggaacatttctccgcacttgtggttttaaagattcc
tttatatcatggattccactaagtgtcatggaaaatcaaaatctggtagcagtccctact
gatgttcggttgtcgtcatggtactctggtccttacttgctggatgcaattgattctctc
ccgtctcctactagagacttctcaaagcctctactaatgcccatatgtgatgtcataaaa
ttgtcccctcaaaatcaggtgtctgcttgtggaaaattggaggctggagctcttcgaagt
ggatctaaggtcttaattttgccgtctgcacaagtagggacagtgcgctcattagagcaa
gactcccgtcattgcacagttgcacgagctggggacaatgtagccgtcagtctacatggc
attgatgcaaaccatgtaatggctggaggtgtgctatgtcatcctgatttcccagttgca
gttgctgaacatttagaattgaaggtgcttgtcttggatggtgcagcccctctcctgatt
ggttctcagttggagtttcacatacaccatgcaaacgaagctgccagagttgcaaaaata
ttatcgatacttgatccaaagactggcaaggttattaagaaggctcctcggtgtctcatt
gctaagcagagtgcagtgcttgaggtggttctgcaggctcctgtttgcgtggaagagttc
tcaaaaaacagagctcttgggagagtgtttttaagagctctaggaagaacagttgccgtg
ggaattgtgactcgaataatagaggaagtacaatag

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