Carica papaya (papaya): 110818789
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Entry
110818789 CDS
T05151
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110818789
Enzymes [BR:
cpap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110818789
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
110818789
NCBI-ProteinID:
XP_021903474
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All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSARGVQLRIQDRYVVMDNGILQVTISKPDGIVTGIEYNGMDNLLEVRNEEDNRGYWDLV
WSQEGATGTTGISYVIRGTSFKVIMESEGQVEISFSRTWDPSVDNGQLAPLNIDKRFIML
RDCSGFYSYAIYEHLKDWPAFNLPQTRIVFKLRKNKFQYMVMADNRQRHMPLPEDRLPGR
GRPLAYPEAVLLVHPVEPEFQGEVDDKYQYSCENKDLKVHGWICFKKPITGFWQITPSNE
FRSGGLLKQNLTSHVGPITLAMFLSAHYAGEDMVLKFKAGEAWKKVFGPVFIYLNSLLDN
SYDPLSLWEDAKQQASVEAQMWPYDFPVSEDFLSSDQRGNVTGRLYVFDRYISDEYITSD
GAFVGLAPPGDVGSWQTESKGYQFWTSVDSGGYFMINDVRPGDYNLYAWVSGFIGDYKYE
TLITITSGCDTDLGNLVYYPPRDGPTLWEIGIPDRSAAEFYVPDPNPMFINKLYINHPDK
FRQYGLWERYTELYPNEDLVYTIGDGDYTKDWFFAHLPRKKDGGENEATTWQIKFKLNSA
EQTGVYKLRLALATANNANLEVRVRDKNSNPPLFSTDIVGHDNTIARHGIHGLYRLYNVD
IPCEMFIEGDNTIFLTQTMCSDLFQGVMYDYIRLEGPPISSS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcgcggagtccaactgcgtattcaagatcgttatgtggtgatggacaacgga
atacttcaagtgacaatatcgaaaccggatggcattgttactggcatagagtataatggc
atggataatttgcttgaagttcgtaatgaagaagataatagagggtattgggatcttgtt
tggagccaggaaggagcaactggaacgacgggaatatcatatgtgatcagagggacaagt
ttcaaagtaataatggagagcgaaggacaagtagaaatctcattctctcgaacatgggat
ccttccgttgacaatggccaacttgcacccctcaacatcgacaagcggtttataatgctt
cgagactgctctgggttttattcctatgccatctacgagcacttgaaggattggcctgct
ttcaacctaccacaaactcggattgtattcaagcttagaaaaaacaaattccagtatatg
gtgatggcagataatagacaaagacacatgccattaccggaagatcgtttgccaggaaga
ggtagacctttagcttatccggaagctgtcttacttgttcatcctgttgaaccagagttc
caaggagaggtggatgataagtatcaatactcgtgtgagaacaaagatctcaaggtgcat
ggatggatttgcttcaagaagccaattactgggttctggcaaatcactcctagcaatgag
tttcgatcgggaggactgcttaaacaaaatcttacttctcatgttggccccattactctt
gccatgtttctcagcgcacattatgcgggagaagacatggttctgaaatttaaagctgga
gaggcatggaagaaagtttttggcccagttttcatttatctcaattctttgctggataac
agttatgatcccctttcactatgggaagatgccaaacaacaggcatccgtcgaagctcaa
atgtggccgtacgattttccagtatctgaagattttttatcgtcggatcaacgtggcaac
gtcactggtagattatatgtatttgataggtatataagcgatgaatatataacatcagat
ggtgcttttgtgggcttggctcctccaggagatgttggatcttggcagacagagagtaag
gggtatcaattctggacgagtgtagactcgggtggttatttcatgatcaatgacgttcgt
cctggcgattataatctctatgcttgggtctctggttttatcggagactataaatacgaa
acccttattacaataacatcaggttgtgatactgatctgggtaatcttgtatactatcct
ccgagagacggaccaacactgtgggaaattggaattcctgatcgttctgctgctgagttt
tacgttcctgatcctaatcccatgtttattaataaactttacatcaaccacccagacaaa
tttagacagtacggactctgggagagatataccgaattatatccaaatgaagatttagtt
tacaccattggcgatggcgattacacaaaagactggttctttgcccaccttccaagaaaa
aaagatggtggagaaaatgaagcaactacgtggcaaatcaagtttaaacttaacagtgcg
gagcaaactggagtttataaattgcgattggcattagccactgcaaataatgcaaatttg
gaggtgagagtccgcgataaaaattcaaatcctcctctattttctaccgatatagtcgga
cacgataacacgattgcaagacatggaattcatggattatacaggctttacaatgttgat
attccatgtgaaatgtttattgaaggtgataacacaatcttcttgacccaaactatgtgt
tctgatctttttcaaggggtcatgtatgactacattcgcttggaagggcctcccatttca
tcctcttga
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