Carica papaya (papaya): 110818825
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Entry
110818825 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110818825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110818825
03036 Chromosome and associated proteins [BR:
cpap03036
]
110818825
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110818825
Coactivators
SAGA/TFTC/STAGA complex
110818825
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110818825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
110818825
NCBI-ProteinID:
XP_021903511
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MDPSIVKLLEEDEDESLHSGADVEAFQAALNRDIECAVSTSEPSDMNAGVNFNKVLSEGS
NHIPSQSVVQWTGSQDDNINSQRQQSVGSMQLQEQHVSELEELKRRSLYENQQQQNDSQE
RKCIPLPQNQSQDNYQQGQTVQISPQITQTTHKCPEKNPVTVREPERVHSQDSKSQYLKL
QKISNQQATNMEPPINPMNRNIKQVPFAALLPAIMPQLDKDRAMQLHTLYAKLKKNEIAK
EVFVRHMKDLVALKPKSHDSQMRQITHSQSVGSSPFGGGSQPVNASVPKFERQNSITDPK
RVHGGSLSHFSNNSAVQPNSVSRQASTSKEQSPGPLSSLTYVKQESVDQVTEQQRNSHLA
TPQGLSAAQVEGGNTIPGSSRDDLSEKQASRIGSSASASIMPSNSVSPSMTTQLDSSVLL
NSRIPSATSPAGVNARTPPKKSSVVQKKPLEALGSSPPQLSKKQKVSGSFSDQSIDQLND
VTAVSGVNLREEEEQLFSGPKEDSRASEASRRVVQEEEEKLLLQKSPLQKKLAEILARCG
LKNISNDVEQCLSLCVEERMRGLICNIIRLSKQRVDMEKARHQVFMTSDVQQQIIMINQK
AREEWEKKQVEAEKLRKLNEVPDDDIGVDGDXEKDECRAKSAKANKEEDDKMRTTAANXA
ARAAVGGDDVXVKWQLMAEARQKREGVVDTSSSQVGKDVSQKPLSASGRNAKDNQETEKR
GHGTSVSASGAVRKLGWNQSGMSQTRVARTVAAKDVIAVLEREPQMCKSTLMYRLCEKIR
SEAVSK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccattgtgaagcttcttgaagaagatgaggatgaatctctgcattcaggc
gcggatgtggaggcattccaggctgcccttaatcgagatatagaatgtgctgtatccact
tctgagccatctgatatgaatgctggtgtaaacttcaataaagttttatctgaaggaagc
aatcatattcctagtcagtcagttgtgcaatggactggtagccaagatgacaatatcaac
tcccaaaggcaacagagtgtagggagtatgcaactgcaggagcagcatgtatctgaacta
gaagaactgaaaagaagatctctttatgagaatcaacagcaacagaatgattcacaagaa
cggaagtgcatccctttaccgcagaatcaatcccaagataattatcagcaggggcaaaca
gttcaaatttctcctcagataactcaaacaacccacaagtgtcctgaaaaaaatcctgtc
actgtacgtgaaccggaacgagtgcatagtcaagatagtaaatctcaatacttgaaattg
cagaagatcagtaatcaacaggccactaacatggagccacctattaaccctatgaatcgc
aatattaaacaagtaccttttgcagctttgcttccagccataatgcctcagcttgataaa
gacagagcgatgcagcttcatactttatatgctaaattgaagaaaaatgaaattgcgaag
gaagtatttgtccgacatatgaaggatcttgttgctttgaaaccaaaatctcatgattcc
caaatgaggcagattactcatagtcaaagtgtgggatcctctccatttggagggggaagt
caacccgtgaacgcgagtgttcctaagtttgagaggcaaaactctataactgatccaaaa
agagtgcatggtggttctctttctcacttttcaaacaattcagcggtgcaaccgaattca
gtttccagacaagcctcaacaagcaaggagcagagtcctggccctctgtcatcactgaca
tatgttaagcaagaatcagtggatcaggtcactgagcagcagcggaactcccatttagct
acaccacagggtttgtctgctgctcaggttgaaggagggaatacaattcctgggtcttca
agggatgatctctcggagaagcaggcttccagaattggatcctcggcatctgctagtatc
atgccctcaaattcagtttcaccttccatgacaacacaactagactctagtgttctgttg
aattctcgaatcccatctgcgacctctccagctggagttaatgcaagaacaccccctaaa
aagtcttcagttgttcagaagaaaccacttgaagcacttggctcctcaccaccacaatta
agtaagaaacagaaagtttctgggtccttttcagatcaaagcattgatcaactcaatgac
gtcaccgctgtcagtggagtcaatcttagagaagaggaagaacaactcttttctgggccc
aaagaggacagtcgagcatcagaagcatctcggagagttgtgcaagaggaagaagaaaaa
cttcttttgcagaaatctccactgcagaaaaaattggctgagatcttggccaggtgtggt
ttgaagaatataagcaatgatgtggagcaatgcttatccttgtgtgtggaggaaaggatg
cgtggactaatatgtaatattatcagattatcaaaacagagggttgatatggagaaggct
aggcaccaggtttttatgacctcagatgtacagcagcaaattatcatgattaaccagaaa
gctcgagaagagtgggagaaaaagcaggttgaagcagaaaagcttcgcaaacttaatgaa
gtgcctgacgatgacattggagttgatggtgacnaggagaaagatgaatgtcgagcaaaa
tcagcaaaggcaaacaaggaggaggatgacaaaatgagaacaacagcagcaaatngtgct
gcacgagctgctgttgggggtgatgacgtgnctgtcaaatggcaacttatggctgaagct
cgccagaaacgtgaaggagtggtagatacttcatcttctcaggtaggtaaggatgtgagc
cagaagcctctatcagcatctggaagaaatgcaaaagacaatcaggaaacagagaaaaga
ggccacggaacttctgtttctgcatctggagctgtcagaaaactcggctggaaccaatct
ggcatgtctcagactagagtagctcgcactgttgctgctaaggatgttattgctgttctg
gaaagggaaccacagatgtgtaagtctacactgatgtatcgcttgtgtgagaagattcgt
tccgaagctgtgtccaaataa
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