Carica papaya (papaya): 110818915
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Entry
110818915 CDS
T05151
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110818915
Spliceosome [BR:
cpap03041
]
Common components
Common spliceosomal components
General mRNP proteins
110818915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
110818915
NCBI-ProteinID:
XP_021903642
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MDFDEYEYLEKTVENPDPQKGKETANGGGGTVKSEEKERSRNSKHGRDEKGDDDGHHSKR
SKSGDESHDHEHHKERSSSHRRSKSRDGERDRYRSSHEKDRDRDRHREERNGRERDRDRE
KDSDRNQDRKEHVHVREKERDEDREREGSHRSRSQSERQRSDREEGDIGRSRDKEHREKE
RERDLRERDRESRRHKEKKEETAEPEADPERDQRTVFAYQICLKATERDVYEFFSRAGKV
RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLSQPVMVKPSEAEKNLVQSTV
AGGSTGLIGPYSGGARRLYVGNLHFNMTEDDLRKVFEPFGTVELVQLPLDEAGHCKGFGF
VQFSRLEDARNALNLNGQLEIASRVIKVSAVTDQTGIQDVGTNTGDFDDDDGGGLALNAQ
SRALLMRKLDRSGTASSITSSLNTPAVNSTSLVGPTAPILGAAPGVPPLVAPLVQGSFPS
VPVLPGTGLQLPGATIPSVEPIGIPSECLLLKNMFDPNVETEPDFDLDIKEDVKEECSKF
GNLKHIFVDKNSAGFVYLRFESVQYALNAQRALHGRWFAGKMITATFMVPQTYEHKFPDS
GK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgagtatgaatacttagagaaaacagttgaaaatcctgaccctcagaaa
gggaaggaaactgccaatggtggtggtgggactgtgaaatctgaagagaaagaacgcagt
cggaattcaaaacatgggagagatgaaaaaggggatgatgatggccatcactccaagcgc
tcaaagtctggtgatgagtcgcatgatcatgaacatcacaaagagaggagctcatcacat
cgtcgctcaaaatctagagatggagaaagggatagatacagaagtagccatgagaaggat
agggaccgtgatagacatagggaggagagaaatgggagggagagagatagggatagggag
aaagattctgatcggaatcaggacaggaaagagcatgtccatgtaagggagaaggagagg
gatgaagacagagaaagggagggttcgcatcgaagcaggagtcaatcagaaaggcagcga
agtgatcgagaagagggtgacatagggaggagtcgggacaaagagcatagagaaaaagaa
agagagagagatttacgggaacgagacagagaaagcagacgacataaagagaaaaaggaa
gaaacggctgagcctgaagctgatcctgagcgggaccagagaacagtatttgcttatcag
atttgcttgaaggcaactgaaagagatgtttatgaattcttctcaagggctggcaaggtg
agagatgttcgcctcatcatggaccgcaattcaagacgttccaagggagttgggtacatt
gagttctatgatgtaatgtcagtccctatggcaatagcactctcggggcagcctcttctt
agtcaacctgtgatggtaaaaccatcagaagcagaaaagaatcttgttcagtcaacggtg
gctggaggttccactggacttataggtccctattctgggggggccagacgtctctatgtt
ggaaatcttcatttcaacatgacagaagatgatcttcgcaaggtttttgaaccatttggg
actgtggagctggtgcagttgcctcttgacgaagctgggcattgcaaaggctttggcttt
gtccagttttcacgtcttgaagatgctaggaatgcattgaatttgaatggacaattggag
atcgccagtcgagtaatcaaggtgtcagcagttactgatcaaactggaattcaagatgtt
gggacaaatactggtgattttgatgatgatgatggtggtggattggcgttgaatgcacaa
tctcgagcacttctcatgcggaagttagatcgcagtggcactgcatcaagcattaccagt
tcattaaacactcctgctgtcaacagcactagccttgttggaccaactgcacccatcctt
ggtgctgcacccggggttcctcccttggttgctcctcttgtacagggttcttttccttct
gtccctgtgctcccaggaacaggtctacaacttcctggtgcaactattccttctgtcgag
cccattggcatcccaagtgaatgtctattactgaaaaatatgtttgatccaaatgttgag
actgaaccagattttgatttagacatcaaggaagatgttaaagaggaatgttcgaaattt
gggaacttgaaacacatctttgtagacaagaatagtgctggttttgtatatctgcgattt
gaaagtgtccaatatgctctaaatgcccaacgagctctccatggtagatggtttgctggg
aagatgatcactgcaacgttcatggtgccacagacgtatgagcataaatttcctgacagt
ggtaaatag
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