Carica papaya (papaya): 110818943
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Entry
110818943 CDS
T05151
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110818943
Spliceosome [BR:
cpap03041
]
Complex B
Other components
Complex B specific factors
110818943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
LisH_TPL
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_SPT8
Ge1_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
DUF7165
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
VPS8_N
Beta-prop_IFT122_2nd
Beta-prop_IP5PC_F
zf_topless
Motif
Other DBs
NCBI-GeneID:
110818943
NCBI-ProteinID:
XP_021903674
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNKLEDLYEQIVIEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDPNEAYGDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVDDTYPTTLGHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEVW
DHISGKLKKDLQYQADDIFMMHDDPVLCVDFSRDSEMLASGSQDGKIKVWRVRTGQCLRR
LERAHSQGVTSLAFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHTSYVNDAIFTSDG
SRIITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIIVCNKTSS
IYVMTLQGQVVKSFSSGKREEGDFVAACISPKGEWIYCVGEDRKLYCFSHQTGKLEHLMT
VHEKDVIGVTHHPHRNLIATYGEDCTMKLWKP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgctagaaatcgaagctcgagatgtcataaagatagtgcttcaattttgcaaagag
aactcattgcaccagacatttcagactctacagaatgaatgccaggtttctctgaatact
gtagacagcattgagacatttgtagctgatatcaacagtggcaggtgggatgcaatattg
cctcaagtggcccaacttaagcttccccggaataaattggaagatctctatgagcagata
gttatagaaatgattgaacttcgagaattggacactgcacgagctattttaaggcaaact
caggcaatgggtgttatgaagcaggagcaacctgaaagatacttgaggctggagcatctc
ctagtcagaacttactttgaccccaatgaggcttatggagattcaactaaagagaaacgc
cgtgcacaaattgctcaagctctcgctgctgaagttactgttgttccaccttcgcgatta
atggctctaattggtcaggctctaaagtggcagcaacaccaaggtttgcttcctccagga
acacagtttgatctatttcgaggaacagctgctatgaaacaagatgtagatgacacatac
ccgacaactcttggacacaccattaagtttggtacaaagagccatgctgaatgtgctagg
ttctcgccagatgggcagtttcttgtctcctgttctgttgatggatttattgaggtctgg
gatcacataagtggaaagctcaagaaggatcttcagtaccaggctgatgacattttcatg
atgcatgatgatcctgtcctttgtgttgattttagcagagattcagaaatgcttgcatct
gggtcacaggatgggaagatcaaggtttggcgggtaagaactggtcaatgcttgcgtcgt
ctggagcgtgctcattctcaaggtgtcacgagtcttgccttttctcgggatggaagccag
ttactaagtacatcctttgacagcactgcaagaatccatggattaaaatctgggaagttg
ttaaaggaatttcgtggccacacatcttatgttaatgatgccatctttacaagtgatgga
agtcgtattattactgcttccagtgattgcactgtgaaggtctgggatgtgaagaccaca
gactgtctacagactttcaagccgcctcctcctttgcgaggaggtgatgcttcagtcaac
tctgttcatcttttcccgaagaacactgatcatatcattgtatgtaacaagacatcatcg
atatatgtaatgacacttcaaggacaggttgtgaagagcttctcatctggtaaaagagaa
gaaggagactttgttgcagcttgtatatctccgaaaggcgaatggatatattgtgttggt
gaagacaggaaattgtactgcttcagccaccaaactggtaaactagagcatctgatgacg
gtccatgaaaaggatgtaattggagtcactcatcatccccacagaaatctcattgctaca
tatggtgaagactgtaccatgaagttatggaagccttga
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