Carica papaya (papaya): 110819414
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Entry
110819414 CDS
T05151
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110819414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpap03032
]
110819414
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110819414
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110819414
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110819414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
110819414
NCBI-ProteinID:
XP_021904280
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MESGSPSKTFLGVRFVLFGFDPVNEHKVRSRLVGGGGIDVGQYSQSCSHVIVDKIAYDDP
VCVAARDDGKTLVTGLWVDHSFDIGMPVDSTSVMYRPPKDLNGILGAKGLIICLTGYQRQ
DRDDIMTMVGLMGAEFSKPLVANKVTHLICYKFEGEKYELAKKMKKIKLVNHRWLEDCLR
DWELLPESNYNKSGYELEMMDAEARDSEEEAEDAPLKQLGGRNMQKSPLNLKTEISNIVE
LPRVEAEVPGMQSNSSRTKDFSPVIAKRMITPDREDRRRQSPNINEANTFVGDDCQEISV
HGNALNVQLPDPCDITPKSTTLVNDLSSTTKSSGSPSPSNVRVTAMSYSRRSPRMPTVSI
SRQELSGNIDGSLKQNVGDSNVTDAHDPSTDRTGSIHFETPHKNGESRNEEGSTSILPQK
RVMSVLVDSSKSRKIELSNKSRVSGSPLVSCRKQGLEVGPLERNDSFKPGNGVSMDEPAI
SNSCASTSMTKSSCLDKKLTDDVSVPESVTSEILHNNINDEEILKTSIRGLAEPTFSRKL
NNDDLGIAKSVNGTGEAEILQNIQQNVELSSLSKRTSVTEKSQIALNLDALQEETDMLVN
KPLRKKMVARKTLGSRAKMKNTVSQKGSIYLSKNASEDNPSTCLGDGKMTTFQEIGNELE
ICPPAGAETTKKIETEIIAEVDAVRKNEFGDDETEAPEEDEQEMKKAHNQENPKVIELAP
KTDAKIGKNTRVHQALDNSKATMHNDAMASEKDMDGIKLKGVVSGRKFGVDEKVLKCELV
KKKSNKEKKQISNKAEAEIFPPVEKSTEPTKDAGERERQNRRDIDNKEMEKEKTVLCSTG
KTSRRKSVSKLVNSAEAEKENMPILCGGQNSCQGELVTKVVKSTKKPLTNSKKSAKVNSK
TVPGGKVLNKVYTEPTWFILSGHRLQRKEFQQVIRRLKGRLCRDSHHWSYQATHFITPDL
RRTEKLFAAAASGRWVLRSDYLTACNQAGRFLPEEPYEWHETGLSEDGAINLEAPRKWRL
LREKTGHGAFHGMNIIVYGECIAPPLDTLKRVVKAGGGTILATSPPYSRFLKSSIDFAII
SPGMPRVDLWIQEFVKHEIPCVVADYLVEYVCKPGYSLERHVLFNTHAWAEKSFSNLQHK
QEEIIRDSNLSPDSAASVGIVCQVCGCHDREEVMLICGDESGSTGCGTGAHIDCCDPPLH
EVPEGDWFCPKCNGNKGSSSPSKKRKKGRSSSKQK
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggaatccggttctccgtccaaaactttcctcggtgtccgtttcgttctcttcggattc
gatcccgtaaacgaacacaaggttcgatctaggcttgttggtggcggtggaattgatgtt
ggtcagtacagtcaaagttgtagtcacgtaatcgttgataagattgcttatgatgatccg
gtatgtgttgctgctcgagatgatgggaaaacactcgtcactgggttatgggttgatcat
agttttgatattggaatgcccgttgacagcacttcggttatgtacagacctcccaaggat
ttgaatgggattctgggtgccaaaggtctaataatatgcttgactggataccagcggcag
gatcgggatgatattatgacaatggttggattgatgggtgcagaattctccaagccattg
gtggcaaacaaagttactcatttaatatgctacaagtttgagggggagaaatatgaactc
gcaaagaagatgaagaagataaagcttgttaaccaccgctggctggaagactgtttgagg
gattgggagcttcttccagaatctaattataacaagagtggctatgagctggagatgatg
gatgctgaagctagggattctgaagaagaggcagaagatgcccccttgaagcagcttggg
ggaagaaacatgcaaaagagccctcttaatttgaaaactgaaatttcaaatattgttgaa
ttgcctagggtagaagcagaggtgccaggaatgcaatcaaattctagtaggaccaaagat
ttcagtccagtcatagctaaaagaatgataactcctgacagagaagacagacgtcgtcaa
tctccaaacattaatgaggccaatacttttgtgggggatgactgtcaagaaatcagtgtc
cacgggaatgctttaaatgttcagttacctgatccatgtgatataactccaaagtctaca
acactggtaaatgatttgtcatctacaactaaaagttctggaagtccctccccatctaat
gtgagggttactgccatgagctattcaaggagatcacctaggatgcctacagtctcaatt
tctagacaagagttgtcaggcaatatagatggttctctgaaacaaaatgttggtgactcc
aacgtgacagatgcacatgatccttcaacagatagaaccggttctattcattttgagact
ccccataaaaatggagaatcacgcaatgaagaagggtcaactagtatattgccccaaaaa
agagtgatgtctgttttggttgatagctctaaatcacggaagatagaacttagtaataaa
tcaagggtcagtggaagtcctttagttagttgcagaaaacaaggattggaagtaggtcct
cttgagagaaatgatagtttcaagcctggcaatggagtttctatggatgagcctgctatc
tctaactcatgtgccagcacttcaatgaccaagtcatcatgtttagacaagaaattgact
gatgatgtctctgtccctgaaagtgtaacgtcagagattctgcacaataatattaatgat
gaggagatcctcaaaacatctataaggggattggcagagccaactttttcaaggaaactt
aataatgatgatctgggtattgctaaatcagttaatgggactggtgaggcagagattttg
caaaatatccagcaaaatgttgagctttcatctctcagtaagagaacatcagtaacggag
aagtcccagatagctttaaatttggatgcacttcaagaagaaactgacatgttggttaac
aagccactgaggaaaaaaatggttgccaggaagactctgggttctagagcaaagatgaaa
aatacagttagtcaaaaaggctctatttacttgagtaagaatgcctccgaagataaccct
tcaacttgtttaggagacggaaaaatgacaacattccaggagattggcaatgaactggag
atatgtcctcctgctggtgctgaaaccacgaagaagatagagacagaaattatagctgag
gtcgatgctgttagaaagaatgaatttggtgatgatgaaactgaggctccagaggaagat
gagcaggagatgaaaaaggcacataatcaagaaaatccaaaagtcattgaattggcaccc
aaaactgatgccaagataggaaagaatacaagagttcaccaagcacttgataattctaag
gctacgatgcataacgatgcaatggcctcagagaaagatatggacgggatcaaacttaaa
ggggttgtttccgggaggaagtttggtgtggatgaaaaagtcttaaaatgtgagcttgtc
aaaaagaaatcaaataaggagaaaaaacaaatttcaaataaagctgaagcagagattttt
cctcctgtggagaaatcgacagaacctacaaaggatgcaggtgagagagagaggcaaaat
agaagggatattgacaataaggagatggaaaaggagaagactgtgctgtgttctacaggc
aaaactagccgcaggaaatctgtgagtaagctcgttaactctgcagaagcagagaaggag
aacatgccaattctttgtggaggccaaaattcttgtcagggagaacttgtaaccaaagtt
gttaaatctaccaagaagccattaacgaacagtaaaaaatctgccaaagttaactctaag
acagtgcctggtggaaaggttttgaacaaagtgtacactgagccgacatggtttatattg
agtggccatcggttacagagaaaagaatttcagcaggttattaggcgattgaaaggtaga
ttatgcagagactcacatcattggtcataccaggcaacacatttcatcactccagatctt
cgccgcacagaaaagttatttgctgcagctgcatctggaaggtgggttcttaggagtgat
tacttaaccgcttgtaatcaggctggaaggttcttgccggaggaaccttatgagtggcat
gagactggccttagtgaagatggtgcaatcaatctagaggctccaaggaagtggcgactc
ttaagggagaaaacaggtcatggtgccttccatggaatgaatattattgtatatggagaa
tgcattgcgccgcctttggatacgctgaagcgtgtagtgaaggctggaggtgggactata
ttagcaacttctcccccttactctcgcttcctcaaatctagcattgactttgccatcata
agtcctggcatgccgcgtgttgatttgtggattcaagagtttgtaaagcatgagataccc
tgtgttgttgcagattatttggtggagtatgtttgcaagcctggatactctcttgaaaga
cacgttctcttcaatacccatgcttgggccgagaagtcattttcaaacttgcaacacaag
caagaagagatcatcagggactcgaacttatcacctgattccgctgctagtgttggcata
gtttgccaagtttgcggatgtcacgacagagaagaagttatgttgatatgtggcgatgaa
agtggttccactggatgtggcaccggagctcacatagattgctgtgatcctccgctccac
gaagtgcccgaaggggactggttttgcccaaaatgcaacggaaacaaaggcagttccagt
ccctctaaaaaaaggaagaagggaaggtcttcatcaaagcagaagtga
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