Carica papaya (papaya): 110819525
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Entry
110819525 CDS
T05151
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110819525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110819525
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110819525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
110819525
NCBI-ProteinID:
XP_021904455
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MARNREALVLLLDVGPSMHGILPEVEKVCSMLIEKKLIYSKSDEVGIVIFGTEETNNELT
KEVGGYGNIMVLRNIKVVDGDLLDSMQQLPQGTVDGDFFDALVVGMDMLIKKYGSTNKGK
KRLCLITNALCPIKDPYEGTKEDQASILAERMSAEGIRMESIIMRGKLSENANITTINEN
YFLLNLFPKKARGKTVYVDNPTSLLGAVRTRNISPVTIFRGDLELTPKMKIKVWVYKKTS
EEKFPTLKKYSDRAPTTDKFATHEVKVDYEYKNVENSGKVVPPEQRIKGYRYGPQVVPIS
SAEWDAVKFKTEKGVKLLGFTNASNVMRHHYMKDVNIFIAEPGNVRAITAVSAIARAMKE
MNKVGILRCVWRQGQGNVVVGVLTPHASERDDVPGSFYFNALPFAEDVREFQFTSFSNFP
ASWQPNEQQQEAADNLVMMLDLTTSGKKEYLQPDFTPNPVLERFYRHLELKSKHPDSAVP
PLDQALKKIVEPDPELISESQSTIDAFYKCFELRENQKLKKSARRLLREKPSGSDEEDGY
EDIPTDFKVVNSIEKEPLAKIEKIGDMTPVQDFEAMMSRRDSADWIAKALKDMQNKIVNL
VENSQEGNNYFAIAMECLVALRKGCILEQEPGEFNDFLHHLQKLCLAKGHGAFLEFLASA
KVTLISKTEAVDSDVSEEEARSFLVKTEPKFEQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaatagagaggcacttgttttattgcttgatgttggtccttcaatgcatggg
attcttccggaggttgaaaaagtctgctccatgctaatagagaagaagctaatatacagc
aaaagtgatgaagttggaatcgttatatttggaactgaagagactaacaatgagcttacg
aaggaagtgggtggatatggcaatattatggtcttgagaaatatcaaagttgttgatgga
gacctccttgattctatgcaacagcttcctcaaggaactgttgatggggatttctttgat
gcacttgttgtcgggatggatatgctgataaagaaatatggatcaacaaacaaaggaaag
aaacgtctgtgtctgatcacaaatgcactatgtcctatcaaagatccatatgaaggaaca
aaagaagatcaagcaagtatcctagctgaaagaatgagtgctgaaggcataagaatggag
agcatcattatgaggggaaagttaagtgagaatgctaacattacaacaattaatgaaaat
tattttcttttgaatttgtttccaaaaaaagcacgtggaaaaacagtgtacgttgacaac
ccaacttcattgctgggtgcagttagaactcgaaacatctctccagttacaatattcagg
ggtgaccttgaactcaccccaaaaatgaagattaaggtatgggtttacaagaaaacatct
gaggagaagttccctaccctgaaaaagtattctgatagagcacctacaactgataaattt
gccacacacgaagttaaagtggattatgaatataagaatgttgaaaactctggtaaagtt
gtaccccctgagcaaaggattaaaggctatcgctatggacctcaagtagttcctatatca
tcagctgagtgggatgctgtcaaatttaagacagagaagggtgtaaagcttctgggattt
actaatgcttcaaacgtgatgaggcaccattacatgaaagatgtcaatatttttattgcg
gaaccgggcaatgtaagggctatcactgcggtttctgccattgcgagggcgatgaaggaa
atgaacaaggttggaattttgcgctgcgtctggagacaagggcaggggaatgttgttgtg
ggggtcttgacaccccatgcatctgaaagagatgatgttcctggttccttttacttcaat
gcacttccttttgcggaggatgttcgagagtttcagttcacctctttcagcaactttcct
gcttcatggcagcccaacgaacagcaacaagaagcagcagataacttggtaatgatgttg
gatcttacaacatctggaaaaaaggaatatttgcagcctgactttacaccaaatcctgtt
ttagagcgattttatcgtcatcttgagttgaaatcaaagcacccagattctgctgtacct
ccacttgaccaagctctcaagaaaattgttgaaccagatcccgaacttatttctgaaagt
cagtccaccattgatgccttttataagtgctttgaacttcgggagaatcaaaagctgaag
aaatcggctaggcggttattgcgagaaaagccatctgggtcagatgaagaagatggttat
gaagatataccaactgattttaaggttgtgaactcaattgaaaaggaacctctggccaag
attgagaaaattggagatatgaccccagttcaggattttgaagcaatgatgtcacgcaga
gatagtgccgattggattgctaaagcccttaaggatatgcaaaataaaatagttaacctg
gtggaaaactcccaagaaggaaataattattttgctatagctatggagtgtttagttgcc
cttcgcaaaggctgcatccttgaacaagaaccaggggagttcaatgatttcctacaccat
cttcagaaactctgcttggcaaaaggccatggtgctttcttggaatttctggcatcggca
aaagtcactttgatctccaagacagaagctgtagacagtgatgtttcagaggaggaggct
agaagctttctggttaaaactgagccaaaattcgagcagtag
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