Carica papaya (papaya): 110819696
Help
Entry
110819696 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110819696
03012 Translation factors [BR:
cpap03012
]
110819696
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110819696
Translation factors [BR:
cpap03012
]
Eukaryotic type
Initiation factors
eIF-3
110819696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
110819696
NCBI-ProteinID:
XP_021904673
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MADVMLMNEIEATAARLGINLAHVDCDSIRLPPGDDFGIVSDDEDVYQDEQLEFESGFGN
IIVVDNLPVVPKEKFEKLEGVIRKIYSQIGLIKDDGLWMPVDPETQKTLGYCFIEYNTPQ
EAELAREKTNGYKLDRSHIFAVNMFDDFDKFMXVPDEWAPPEIRPYTPGENLQKWLTDEK
ARDQFVIRSGSDTEVLWNDARHLKPEPVYKRSYWTESFVQWSPLGTYLATVHRQGAAVWG
GATTFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANKVVINIFDVRTGKVMRD
FRGSADEFAIGGAGGVAGVSWPVFRWGGGKEDKYFAKIGKNMISVYDTETFGLIEKKSLK
VENVMDFSWSPTDPIFALFVPELGGGNQPARVSLVQVPGKEELRQKNLFSVSDCKMYWQS
NGEYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFA
VIHGDSPRPDVSFYTMRSGNNMVRVSKLTTLKGKQANALFWSPAGRFIILAGLKGFNGQL
EFYNVDELETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILK
DHFFQFLWRPRPPSFLSAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDHEKRRLLKEE
WDKWVNEWKRLHEEEKLERQKLRDGEASDEEEEYEAKEIEVEELLDVSEEILSFE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaatgttgatgaatgagatagaggcgacagcagcgcggctgggaatcaat
ctcgcccatgtggattgcgattcaatccgtcttccccctggtgatgacttcggcatcgtt
agtgatgacgaggatgtttaccaagatgagcagctggagtttgaatctgggtttggaaac
attattgttgttgataatcttccagttgttccgaaggaaaagtttgagaagcttgaaggt
gttattcgtaaaatttatagtcagattggcctcattaaagacgatggcctttggatgcct
gttgatcccgaaactcagaaaactttgggttactgtttcattgagtataatactcctcag
gaagctgaactcgcgagggagaagacaaatggctacaaattggacagatcacatattttt
gctgttaacatgtttgatgattttgacaagttcatgnaagttccggatgagtgggctccc
cctgaaattagaccatatactcctggggaaaatctgcaaaagtggttgactgatgaaaag
gctcgagaccagtttgtgattcgttctggttcagatactgaggttctatggaatgatgca
agacatttgaagcctgagcctgtttacaagcgttcttactggacagagagctttgtgcag
tggtcccctctagggacctatttggcaacagttcatagacaaggtgctgctgtttggggt
ggtgctacgaccttcaatcgcttgatgcgatatgctcatcctcaggttaaactcattgat
ttttctcctggtgagaaatacttggtgacctacagcagccatgaaccaagtaatcctcga
gatgcaaataaagttgtcattaatatctttgatgtgagaactggaaaagtgatgagagat
tttcgtggaagtgctgatgagtttgccattggaggagctggaggtgttgcaggcgtgtct
tggcctgttttcagatggggtggtgggaaagaggacaagtattttgcgaaaattggaaaa
aacatgatctcagtctatgacactgagacctttggccttattgaaaagaaatctttgaag
gttgaaaatgttatggattttagctggtcgccaactgatcccatttttgcactttttgta
cccgaacttggtggtggtaaccagcctgcaagggtgagtcttgttcaagtccctggcaaa
gaggaactaaggcagaaaaatctttttagtgttagcgattgcaaaatgtattggcagagc
aatggagaatatcttgctgtgaaggtggatcgctatacaaaaacaaagaagagtacatac
acaggatttgaacttttccggattaaagaaagggacataccgattgaagtgttggagctt
gacaataagaatgataagataattgcttttgcttgggagcccaagggtcacagatttgct
gttattcatggtgatagtccaaggcctgatgtaagtttctacactatgcgaagtggtaac
aatatggttcgggtctcgaaactcactaccctaaaaggcaaacaagcaaatgctctcttc
tggtcacctgctggtcgtttcataatcctggcaggattgaagggcttcaatggccagctg
gaattttataacgttgatgagctggagacaatggcaactgccgaacattttatggcaaca
gatatcgaatgggatccgactggcaggtatgtagcaacttcagtgacatcagttcatgaa
atggaaaatggtttcaacatttggtccttcaatggcaaactactgtacaggatactgaag
gatcatttcttccagtttctgtggcggcctaggcctccatctttcttgagtgcagagaaa
gaagaagagattgcgaagaacttgaagaaatatagtaagaagtatgaggcagaggatcag
gatgtgtcgttgcttttgagcgagcaggatcatgagaagaggagattgttgaaggaagaa
tgggacaagtgggtgaacgagtggaaacggttgcacgaagaagaaaagctagagaggcag
aaattgagggatggagaagcgagcgatgaagaagaggagtacgaagcaaaagaaatcgag
gttgaggaattattggatgtctctgaggagatcctttctttcgagtag
DBGET
integrated database retrieval system
