Carica papaya (papaya): 110819927
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Entry
110819927 CDS
T05151
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28
KO
K12900
serine/arginine-rich splicing factor 10
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110819927
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpap01009
]
110819927
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110819927
Protein phosphatases and associated proteins [BR:
cpap01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110819927
Spliceosome [BR:
cpap03041
]
Common components
Common spliceosomal components
SR proteins
110819927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
110819927
NCBI-ProteinID:
XP_021904967
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MARYRSRSRSYSPRRRSRTPPRGRKRYDDDRYRDSRSIRDRRSPAPSGLLVRNLPLDARP
EDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAEAKQRMNHKVIGGREIRI
VFAEENRKTPQEMRVNSRTSGRHGGNNRRTPPRSPRRRYRSYSRSPSPARHDSRDPVPRS
RFPQQSRSISQSLSPHDERVFKSNQRSPSSRENGQSLHHERDYVPSRSRSPRGISRSPSR
SRSRSFSPH
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatacaggagtcggagcagaagctacagccctcgtcgccgcagcaggactccc
ccacgcggcaggaagcggtatgacgatgatcgttatcgtgacagccggtctatcagggac
cgccgctctcctgctccatctggtttgcttgtccgcaatcttcctcttgacgccaggcct
gaagatcttaggattccttttgagcgctatggtccagtgaaggatgtctatcttccaaag
aactattatacaggtgaacctcggggctttggatttgtgaaatttcgctatgctgaagat
gcagcagaagcaaagcagcgaatgaaccataaagttattggtgggcgtgagataagaata
gtttttgctgaggagaacaggaaaactcctcaagaaatgcgtgtgaattcccgcacaagt
ggtcgacatggaggaaacaaccggagaacaccgccaaggtccccaaggcgcagatatcgc
tcttactctcggtcaccttcaccagctaggcatgattcaagggatccagtgccaaggagc
cgcttcccacaacaatcaagatctatctcacagtcactttctccacatgatgagagggtt
ttcaagtcgaaccagaggtccccaagttcaagggagaatggtcaaagtctgcaccatgaa
agggactatgtacccagcaggtcaaggagtccaaggggtattagtcgcagtccttcaagg
tctcgttcacgatcgtttagcccgcattga
DBGET
integrated database retrieval system
