Carica papaya (papaya): 110820430
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Entry
110820430 CDS
T05151
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110820430
03009 Ribosome biogenesis [BR:
cpap03009
]
110820430
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110820430
Spliceosome [BR:
cpap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110820430
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
Helicases
110820430
Pre-60S particles
110820430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
110820430
NCBI-ProteinID:
XP_021905586
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MEQVVNSLEEEKKRNRKRNRAKKLDQENSNGNVEKDEVEENKICDKEDKKMKKKKQNKKV
KREERVDGEAEEERQKEEKEEEAVGEEKDEQETKAMQRGSGIMSTESFESLGLSEHTFRS
IKEIGFLHMTQIQARAIPPLMIGKDVLGAARTGSGKTLAFLIPAIELLYNVHFTPRNGTG
VIVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRGEAERIVKGVNLLVATPGRLL
DHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKLLPKNRQTALFSATQTKKVED
LARLSFQTTPIYIDVDDGRRKVTNEGLQQGYCVVPSSKRFILLYSFLRRNQSKKVMVFFS
SCNSVKFHAELLRYIKVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPA
VDWIVQYDPPDEPKEYIHRVGRTARGEGARGNALLFLIPEELQFLRYLKAAKVPVKEYEF
DDKKLANVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVAASF
CFSCPPKVNLTIDSSASKFRKKIRKTEGSRNGFSESNPYGRQKVEDDTRQFVRF
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagtagtcaacagcctggaggaggagaagaagaggaaccggaaacgaaacagg
gcaaagaaattggaccaggaaaattctaacggcaatgttgagaaagatgaagtggaagaa
aataagatctgtgacaaggaggataagaagatgaagaaaaagaagcagaataagaaagtg
aagagggaggagagagtggatggtgaggcagaggaagagaggcaaaaggaagagaaggaa
gaggaagctgtaggggaagagaaggatgaacaagaaactaaagctatgcagagagggagt
gggataatgagtactgagtcatttgagtcactgggattatctgagcatacttttaggtcc
atcaaagagatcggttttttgcatatgactcagatccaagccagagcaatcccaccactt
atgattggcaaagatgtccttggagctgcaagaacaggatctgggaaaacacttgctttt
ctaataccagctattgagttattatataatgttcatttcactcctcgcaatggtacaggt
gttattgtcatttgccctacaagagaacttgctattcagactcatgctgtcgcaaaggac
cttctcaagtaccactcgcagactcttggcttggtcattggtggttcagcgagaagagga
gaagcagaacgtattgtgaaaggagtaaatttattagtggcaactcctggtcgacttctt
gatcatcttcaaaatactaagggatttatatataaaaacctgaagtgccttatgattgat
gaagcagatagaatattggaagcaaactttgaagaagaaatgaaacaaattatcaagctt
cttcctaagaataggcaaactgctttgttttcagctactcagacaaagaaggttgaggat
cttgcacgcttgtcattccagacaacccctatttatattgatgtggatgatggaagacgc
aaggtgaccaatgaaggactgcaacaaggctactgtgttgtgcccagtagcaagagattt
attcttctatattccttcttaaggaggaatcagtcaaagaaagtgatggtattcttctct
tcatgtaactcagtcaagttccacgccgaactccttagatacattaaggtggattgcttt
gatattcatggaaagcaaaagcagcagaaacgtaccacaacgttctttgacttctgcaaa
gcagaaaaaggaattttgttatgtactgatgttgctgctcgaggacttgatattcctgct
gtggactggattgttcaatatgatcctcctgatgaacccaaggaatatattcatagggtt
ggtcggacagcccgtggagaaggagcaagaggaaatgccctactcttcctgattccagaa
gagttgcaattccttcgttacctgaaggcagcaaaagttcctgttaaagagtatgaattt
gatgacaaaaaattggcaaatgttcagtctcatttggagaagttggtagccaacaactat
tatttgaataaatcagctaaagatgcatatagatcctacatattggcatataactcgcac
tctatgaaggacatttttaatgttcaccgcctagatcttcaggctgttgctgcttcattt
tgcttttcttgccctccgaaagtgaacctgaccattgacagtagtgcttccaaatttaga
aagaaaatccggaagacagaaggaagtcgaaatggattcagcgaaagcaatccttatgga
agacagaaggtcgaggatgatactcgacaatttgttaggttttag
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