Carica papaya (papaya): 110820509
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Entry
110820509 CDS
T05151
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110820509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110820509
03036 Chromosome and associated proteins [BR:
cpap03036
]
110820509
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110820509
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110820509
PBAF complex
110820509
GBAF(ncBAF) complex
110820509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110820509
NCBI-ProteinID:
XP_021905688
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MNNSNLHKNVGAPSPLNHQSHLPQSKPQPQVGSGSSFPGHFQLSEPQGHVLAQSQYVQAH
QQVLSQGAHSQFQPQLQSLGQAHTQVHNPNAGATGVSSPSVSTPGTANAKRATQRPPSKA
SASSNATTSSLFKTMELAPAAVRKKRKPPERQIPDKVAAILPESALYTQLLEFEATMDAA
LARKKIDIQEALKAPPRMQKTLRIYVFNTFSNQEKAPQNDNVESPSWSLKIIGRILEDGR
DPVLAGPMQKPNSSYPKFSSFFKKITIYLDQSIYPNNHVILWENSRSPALREGFEIKRKG
DKEFTAIIRLEINYLPEKFRLSPALAEVLGIEVDTRTRIIAAIWHYVKSKKLQNPSDPSF
FICDTPLQKVFGEEKVKFSMVPLKLAQHLSLPHPIHVEHRIKLSGDCPSGTTCYDVLVDV
PFQSGKEMGAFLANIERHNDIDSYDELIGAAIQKIQGHYRRRAFFLAFSQSPAEFINALI
ASQSKDLKLVAGDANHNAEKEGQSDFYNQPWVEDAVIRYLNRKSAGSDAHGST
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaataatagtaacctacataagaatgttggggcaccatccccattgaaccaccagtcc
cacctcccacagtctaaacctcaaccacaagttggttctggttcttcttttccgggtcac
ttccagttgtcagaacctcaaggccatgtgcttgcccagtcacaatatgtgcaggctcat
cagcaggtcctctctcaaggtgctcattcccagttccaaccacagttgcaatcattaggt
caagcacatactcaggtgcataacccaaacgctggtgctactggagtgtcatccccatct
gtatcaacgcccggcacagcaaatgctaagagagctactcaaaggccaccttctaaagcc
tctgcttcatccaacgccactacctcgtcactgtttaagaccatggagttggcacctgct
gctgttagaaagaagcggaaacctccagaaaggcagatacctgataaagttgctgcaatt
ttgccagagtctgctttatatactcaattgctcgagtttgaggctacgatggatgctgca
ttagcaagaaaaaagattgacattcaagaggcacttaaagcccctcctcgtatgcaaaag
acgcttaggatatatgtttttaatactttttctaatcaggaaaaagcccctcagaatgat
aatgtggagtccccctcttggtcacttaaaataattgggaggatattggaagatggtaga
gatcctgtgctagctgggccaatgcagaaaccaaactcttcatatccaaaattctcatca
ttcttcaaaaagattacaatatacttggaccagagtatttatccaaataaccatgtcatc
ctatgggaaaattctcgttcgcctgcacttcgtgagggatttgagattaagaggaaaggg
gataaggagtttactgcaattataagactagaaataaattatttgcccgagaaattcaga
ctttcacctgcactggcagaagtccttggaattgaggtagatacgcgtacaagaattata
gctgcaatttggcactatgttaagtctaagaagctacagaatccaagtgatccatctttc
tttatctgtgatactccactccaaaaggtgtttggggaagagaaagtgaaattctccatg
gttcctctgaagctagcacagcacttatctctgccacatccgatacacgtggagcataga
atcaagctttcaggggattgtccatcaggaacaacttgttatgatgtgttggttgatgtt
cctttccagtcagggaaggaaatgggtgcttttttagcaaacatagagaggcacaacgac
attgattcttatgatgaactaattggtgctgctatacagaagatacaggggcattatcga
aggcgggctttctttcttgcgttcagtcaatctccagcagagtttattaatgctttaatc
gcttctcaaagtaaggatctaaagcttgttgccggagatgccaaccacaatgcagaaaaa
gagggacaatctgatttctataatcaaccatgggttgaagatgctgttatccgttacctg
aaccgcaagtctgctggaagtgatgcgcatgggagcacctga
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