Carica papaya (papaya): 110820614
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Entry
110820614 CDS
T05151
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03440
Homologous recombination
cpap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110820614
03450 Non-homologous end-joining
110820614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpap03032
]
110820614
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110820614
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110820614
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110820614
BRCA1-C complex
110820614
NHEJ (non-homologous end-joining)
MRX complex
110820614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
110820614
NCBI-ProteinID:
XP_021905826
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MTHISGLNRGKFVRMEDLPSEDISDTLRILVATDCHLGYMEKDEVRRHDSFQAFDEICSI
AEQKQVDFLLLGGDLFHENKPSRSTLVKTIEILRRHCLNDRPVQFQVVSDQTVNFANIFG
HVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQIT
LYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQDGCEVSDWFNILVLHQ
NRVKTNPKNAINEHFLPRFLDFVVWGHEHECLIDPQEVSGMGFHITQPGSSVATSLIDGE
SKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYAEVILKDEADIDPHDQNSILEHLDKMVRN
LIERSTKKNTNRSELKLPLARIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSRK
GRNEAKIDDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKLAFYS
CVQYNIEETRNKIAKDSDPLKLEEEDFILKVGECLEERVKERSLHPKDTTEFTSPGQSLG
NDRRRDAAGIGNTVSFSDDEDTTQISGLKFPARRRKGSAASQSSHDASNVVKTKTSTRGR
GRGRGSMNLKQTTLHATLGFRQSQRSASAAATTAVRSIADEEDMVESASSEAEQYCTNDV
ENSSEGDENLQSRGRKRAAPRGRGRGSTSSKRGRKSDNSSSIHRKLMNKDDDEEEEEEEE
RARKLKKSQPRVSDIPLCYFLKRSILFPKSFNRVLGHFTGFFSSVLQK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgactcatatttcaggtctaaataggggcaagtttgtcaggatggaagacttgcctagt
gaggatattagtgatacactccggatacttgttgctaccgattgccatttgggctacatg
gagaaggatgaagttcgtcgacacgattcatttcaagcatttgatgaaatatgttctata
gcagagcaaaagcaggtggacttcttgcttcttggtggtgatcttttccatgagaataag
ccctccaggtcaacattagtgaagaccattgagattcttcgacgccactgtcttaatgac
agaccagtgcagttccaagttgtcagtgaccagacagtaaattttgcaaatatatttggc
cacgtaaattatgaagatcctcatttcaatgttggtttgcctgtgttcagtattcatgga
aaccatgatgatcctgctggagtggacaacctttctgctgtggatatcctctcagcgtgc
aatcttgtgaattacttcgggaaaatggttcttggtggttctggtgttggacagattact
ctctatcctattcttatcaggaagggttcaacagctgtagcgctctatggtctagggaat
atcagggatgaacgactcaatagaatgtttcaaacaccacatgctgtacagtggatgcgg
cccgaagctcaagatgggtgtgaagtttcagactggttcaacattctggtacttcaccag
aacagggtgaagacaaacccaaaaaatgcaataaatgagcactttttgccgcggttcctg
gattttgtagtatggggccatgaacatgaatgccttattgaccctcaggaagtatcggga
atgggatttcacattacgcagccaggttcttcagtagcaacatcattgattgatggagaa
tcaaagccaaagcacgtgcttcttctagagattaagggaaatcaatatcgtccaacaaag
atacctttgacttctgtgaggccttttgaatatgcagaggttattttaaaggatgaagct
gacattgatccccatgatcaaaactcaattcttgaacatttggataaaatggtcagaaat
cttatagagagatccaccaagaagaatactaacaggtcagagctcaagctcccattagcg
cgcattaaggtagactactctggattcatgacaataaatcctcaaagatttgggcagaaa
tatgtggggaaggttgcaaatccccaggatattcttatattctcgaagtcttctagaaag
ggaaggaatgaagctaaaatagatgattcagaacgccttcgcccggaagaacttaatcaa
caaaatatagaagctttggttgctgaaaataacctgaaaatggaaatccttccggtcaat
gatttggatgtcgcattgcacaattttgtcaacaaggatgataaactggctttttattct
tgcgtgcagtacaacattgaagaaactcgaaacaaaatcgctaaggattcagatcctctg
aaattagaggaggaagattttatacttaaagttggagagtgcttggaggaacgtgtcaaa
gaaaggtccttgcaccctaaggacactacagaattcacctcgcctgggcagtctttgggg
aatgacaggaggagagatgcggcaggaattggaaatacagtttccttcagtgatgatgaa
gacacaacacaaatatctggtttgaagtttcctgctagacgtcggaaaggatcagcagct
tctcagtcatctcatgatgcctcaaatgttgttaaaactaagacttctactagaggaagg
ggtcgggggagaggatctatgaacttgaagcagacaactcttcatgcaacactaggtttt
cgtcaatcccagagatctgcatcagctgcagcaacaactgctgtccgaagtattgcagat
gaggaggatatggtagaatctgcttcaagtgaagcagagcaatattgtaccaacgatgtt
gaaaacagttcggaaggagatgaaaacctgcaaagtagaggacgcaaaagagctgctcct
aggggtagagggaggggttctacatcctctaagcgtggaagaaaatcagataactcttct
tcaattcatagaaagctgatgaataaagatgatgatgaagaagaagaggaagaagaagaa
agagcgaggaaactgaagaaatctcaacctcgggttagtgacattcccttatgttatttt
ctaaaaagaagcattttgtttccaaaaagtttcaatagggtactaggtcactttactgga
ttcttctccagtgttcttcaaaagtaa
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