Carica papaya (papaya): 110820724
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Entry
110820724 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap00040
Pentose and glucuronate interconversions
cpap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110820724
Enzymes [BR:
cpap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110820724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110820724
NCBI-ProteinID:
XP_021905994
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSWSCIIFLAILLPASFAFSARSLMQISDATRWNSRRQLEADNMTAPCFTSNHIDACWRC
DPQWETNRKMLADCAVGFGRNAIGGRDGELYVVISDGPCITXHNASNVIVHNIHIKNCLP
TENFLDGSSTDGDGISIFASRDVWIDHCTLSSCYDGLIDAVYGSTAITISNNIMEHHNEA
MLLGHSDEFFADKGMQVTIAFNYFGEGLVQRMPRCRHGYFHIVNNVYSGWEKYAIGGSAN
PTINSQGNVFTAADDNFTKEILWGDSKKQREHHLMAWYMVKNLLSKGGLGIRPQAALRGG
LAGTREESSIVLGSRLGIATSSASGLILSL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggtcctgcatcatcttcttagcaatcttattacctgctagctttgcattctct
gctcgttctctgatgcagatatcagatgcaaccagatggaactcaagaaggcagttggag
gcagacaacatgaccgccccctgttttactagtaaccacattgatgcctgttggaggtgc
gacccccaatgggaaaccaatcggaaaatgctagccgattgtgcagttgggtttggtcgc
aatgccattggcggccgagatggtgaactctatgtggtcatatcggatggaccatgcata
actnatcataatgctagtaatgtcatcgtacataacatccatataaagaactgcttacca
acagaaaattttctagatggcagttccaccgatggagatgggatatcgatatttgcatcc
agagatgtgtggattgatcattgtacactctccagctgctatgatggactcatagatgct
gtatatggctccacagccataacaatctcaaacaacattatggagcatcataatgaggcc
atgcttttgggtcacagtgatgagttctttgctgataagggcatgcaagtaacaattgcc
ttcaattactttggagaaggtctggttcaaagaatgccaaggtgcagacatggctatttt
cacatagttaataatgtttactctgggtgggagaagtatgcaattggtggaagtgcaaat
ccaacaataaatagccaaggaaatgtattcacagcagcagacgacaatttcacaaaggag
attttgtggggtgattctaaaaagcaaagagaacatcatttgatggcttggtacatggtt
aagaatcttttgagcaagggtggccttgggattaggccccaagcagccctcagaggtgga
ttagcaggaactagagaggagtcctcgattgtactaggttcaaggttgggaatagcaacc
tcatccgcttctggtttgatccttagtttgtag
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