Carica papaya (papaya): 110820776 Help Entry 110820776         CDS       T05151                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism cpap  Carica papaya (papaya) Pathway cpap03013   Nucleocytoplasmic transport cpap03040   Spliceosome Brite KEGG Orthology (KO) [BR:cpap00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110820776   09122 Translation    03013 Nucleocytoplasmic transport     110820776  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpap03019]     110820776    03041 Spliceosome [BR:cpap03041]     110820776 Messenger RNA biogenesis [BR:cpap03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      110820776 Spliceosome [BR:cpap03041]  Complex C   Other components    EJC/TREX     110820776  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     110820776 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_DCAF12 Tricorn_2nd TRM82_WD Beta-prop_IFT80_2nd WDR90_beta-prop_4th PAC11 TP_0598_N CFAP251_N DUF7099 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_ACSF4 CNH WD_LRWD1 Beta-prop_WDR11_1st Motif Other DBs NCBI-GeneID:  110820776 NCBI-ProteinID:  XP_021906050 LinkDB All DBs Position Unknown AA seq 314 aa AA seqDB search MEDVIPFKNLYSREHQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGS HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSL RPLDTLMAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDIKEMLCVRTFTKLEWPVRTISF NYTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKSPKYN SDEGVFRIFGFESS NT seq 945 nt NT seq  +upstreamnt  +downstreamnt atggaagatgtaattccttttaagaatctgtacagcagagagcatcaaggtcacaaaaag aaggttcactcggtagcttggaactgcacgggaacgaagctagcatctggttctgttgat caaactgctcgtgtctggcatattgagcctcacggtcatggtaaggtcaaagatattgaa ctgaagggacatactgatagcgttgatcaattgtgttgggaccctaaacatgctgacctg attgcaactgcatctggtgacaagactgttcgattatgggatgctcgcagtggaaagtgt actcagcaggcagaacttagtggagagaatatcaacatcacctacaaacctgatggttca catgtagctgttggaaatagggatgatgaactgacaatattggatgttcggaaatttaag ccaattcataggcgcaagttcaattacgaggtaaatgagattgcttggaatatgactggg gagatgttctttttaacaactggaaatggtactgttgaagtcctggcatacccatctctt cggccactggacaccctcatggctcacacagctggttgctattgcattgcaatcgatcca aaaggaagatactttgctgttggaagtgctgattccttagtcagcctttgggatatcaag gagatgctctgtgtgagaacattcacaaaactcgaatggcctgtcaggacaataagcttc aactacacgggagattatattgcttctgccagtgaagacttgtttattgatatatcaaac gttcatactgggagaactgtgcatcagattccatgtcgagctgccatgaacagtgtcgaa tggaatcccaagtataatttgcttgcctatgcaggagatgacaagagtcccaaatataat tctgatgaaggtgttttccgcatatttggcttcgaaagctcctga

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