Carica papaya (papaya): 110821271
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Entry
110821271 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110821271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110821271
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
GTPase
110821271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
AAA_16
MMR_HSR1
AAA
AAA_22
Motif
Other DBs
NCBI-GeneID:
110821271
NCBI-ProteinID:
XP_021906755
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MAANTGILGQSHKEHRSRQSGPSANKKAKAKKKKQDISDENKQNPKAFAFRSAVKAKRLQ
SRAVEKEQRRLHLPTVDRSYGEPSPYVVVVQGPPQVGKSLLIKCLVKHYTKQNLPEVRGP
ITVVSGKKRRIQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFP
KVMGVLTHLDKFKDVKKLKKTKQRLKNRFWTEIYDGAKLFYLSGLIHGKFPKREIHILSR
FISVMKFHPLSWRTSHPYVLVDRFEDVTPPGRIEMNKKCDRNITLYGYLRGCNMKKGMKV
HIAGVGDYGLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGSGDLLYDKDAVYININ
DHFVQFSKVDGEDEGTARKGKDGDVGEVLVKSLQNTKYSIDEKLEKSFISLFGQKPGISL
GAGTDDEDTHPAVANIRDIEPSEQYQPREDAEGDEIDEESDAEDLDDSASLDHDEDCLKG
SQIKSDKTDSDGENVDTSNWQTHCKDNLMQEVEVHGGRLRRKAVFKDNIYDNEMKDLDED
DENDDEDDSDDDDDDNDDEDLSEEDGEDQALDDDGLGNISKWKESLLERTASRQNINLMQ
LVYGNPASASTTYIDNDQDGSEDEEGDGDEFFKPKGEWSKKSGEGLRDENVNAEDVSKFM
NYAINKNWKEKQICESIRDRFTTGDWSKAAQRNDISGPAEDGEDVYGDFEDLETGEKHES
HSKDDPGNGGIQKEDDSAVEERRRKKLALRAKFDAQYDGSELMDEETDGKNGAKFHRGQP
NEPGYVDKLKEEIELRKQMNMAELNDLDEATRLEVEGFQTGTYVRLEVHDVPFEMVEYFD
PCHPVLVGGIGFGEENVGYMQARLKRHRWHKKVLKTRDPIIISIGWRRYQTTPIYAIEDR
NGRHRMLKYTPEHMHCLAMFWGPLAPPNTGFIAVQSLSNNQASFRITATAVVLEFNHATK
IAKKVKLTGYPCKIFKKTALIKHMFTSDLEVARFEGASIRTVSGIRGQVKKAAKEEIGNQ
PNKKGGPLGEGIARCTFEDRILMSDIVFLRAWTSVEVPRFYNPLTTALQSRDKTWQGMKT
VAELRREHNLPVPVNKDSLYKAIERRPRKFNPLVIPKSLQEALPFASKPKNIPSQKRPSL
EKRRAVVMEPSERRVHALVQHLQLIKNEKMKKRKLKEEEKRKKLEAERAKDEQLSKKRKR
EERRERYREQDKLKKKIRRHDVS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatacgggtatcctgggtcagtcacataaggaacatagatctcgtcaatct
ggtccctctgccaataaaaaggcaaaggccaagaaaaagaagcaggatatctctgatgag
aataaacaaaacccaaaggcttttgcttttcgttcagctgtaaaagcaaagcggctacaa
tcacgtgctgtagagaaagagcagcgtaggctacatcttccaactgttgatcgctcttat
ggtgaaccatctccatatgttgttgtagttcagggacctccacaggtagggaagtctctt
ctaatcaaatgtcttgtgaagcattacacaaagcaaaatttgccggaggttcgaggacca
attactgttgtgtcaggaaagaaaaggcgaatacagtttgtagagtgcccaaatgatatc
aatggtatgattgatgctgccaagtttgctgatctagctttgctcctcatagatggaagt
tatggttttgaaatggaaacctttgaattccttaatattttacaagttcatggatttcca
aaagttatgggagtcctcacacatcttgacaagttcaaggatgtaaagaaactaaagaaa
acaaaacagcgtctgaagaatcgcttctggacagagatatatgatggagcgaaattgttc
tatttatctggtcttatccatggaaagttcccaaaacgtgaaattcacattctttcacga
tttatatctgtcatgaaatttcatcctctttcttggagaacatctcatccctatgttctc
gttgatcgttttgaagatgttactcctccaggaagaattgaaatgaataagaaatgtgat
cgaaatatcacgctctatggttatttacgcggttgtaacatgaaaaaaggaatgaaggtt
catattgctggtgttggtgattatggtttagctggtgttacagccttagcagatccttgt
cctttgccatccgctgccaagaagaagggattgcgtgacaaggaaaagcttttttatgct
cctatgtctggtagtggggatcttctgtatgacaaagatgctgtctacataaacataaat
gaccacttcgtgcagttctcaaaagttgatggtgaagatgagggaactgcacgcaaagga
aaagacggagatgttggtgaagttttggttaaatcacttcagaacacaaaatattcaatt
gatgaaaagttagaaaagagtttcatcagtctttttggccaaaagcctggtatctctttg
ggagctgggactgatgacgaagatactcatccagcagttgccaatattcgtgatatagag
ccttcagagcagtatcaacctagagaagatgctgaaggtgatgagattgatgaagaaagt
gatgctgaagatctggatgattcagcatctttggaccatgatgaagattgtcttaagggt
tcacagatcaagagtgacaagactgactctgatggagaaaatgttgatacatcaaattgg
caaactcattgtaaagataacttaatgcaagaagtggaggttcatggtggaaggttaagg
aggaaagctgtctttaaagataatatttatgataatgaaatgaaggatttagatgaggat
gatgaaaatgatgatgaagatgatagtgatgatgatgacgatgacaacgatgatgaggat
ctttcagaggaagatggagaagatcaagctttagatgatgatggcctgggaaacatatca
aagtggaaagaatccttgctagaaaggactgcctcaagacaaaatatcaatctgatgcaa
cttgtatatggaaatcctgcatcagcatcaacaacttatattgataatgaccaggatggc
agtgaagatgaagaaggtgatggtgatgaattttttaagcctaaaggagaatggagtaag
aaatctggagaaggattaagagatgaaaatgtcaatgctgaggatgtttccaaatttatg
aattatgcgataaacaaaaactggaaagagaaacaaatatgcgaaagtattcgtgatcgc
tttaccactggtgattggtcaaaagctgctcagagaaatgacatatctgggcctgctgaa
gatggtgaggatgtctatggtgattttgaagatttggagacaggtgagaagcatgaaagc
cattctaaagatgatcctggcaatggtgggatccaaaaggaagatgattcggcagttgag
gagagacggagaaaaaagcttgctctccgtgcaaagtttgatgcccaatatgatggatct
gaattaatggacgaagaaactgatggcaaaaatggggccaagtttcaccgtggtcaacct
aatgaacctggatatgttgacaagttaaaggaggagattgaactccggaagcaaatgaat
atggctgaactcaatgatcttgatgaggccactagactagaggtagagggcttccagact
gggacgtacgttagattggaagttcatgatgttcctttcgagatggttgaatattttgat
ccctgccatcctgttttggttggaggaattggctttggcgaggaaaatgttggatacatg
caggccaggttaaagcggcacaggtggcacaagaaagtgctgaagactagagatccaata
attatctctattggatggaggcgctaccaaactacgcctatttatgcaattgaggatcga
aatggaaggcatcgcatgcttaagtacactccagaacacatgcattgccttgccatgttc
tggggccctcttgctcctcccaacactggatttattgctgtccagagcttatcaaacaat
caggcatcatttcgcattacagctactgctgttgtacttgagttcaaccatgcgacaaaa
atagcgaagaaagtcaagttgacaggttacccctgcaagatctttaaaaagacggcactt
atcaagcacatgtttacttcagatcttgaagtagctcgttttgaaggtgcatcaattagg
actgtcagtgggatccgtggacaggtgaaaaaggctgcaaaggaagagattggcaaccag
ccaaataagaagggagggccacttggtgaagggattgccagatgtacttttgaagacagg
attctgatgagtgacattgttttcttgcgtgcgtggacttcagtagaagttccacgattt
tacaacccactgaccacagctttgcaatctcgtgataagacctggcagggaatgaaaact
gttgccgaactgaggagagagcataatcttcctgttccagtcaacaaggattcgctctac
aaggccattgaaaggaggccaaggaagttcaacccgctcgtcattccaaagtcattacaa
gaagctctcccatttgcatcgaaacccaagaatattcccagtcagaaacggccgtctctt
gaaaaaagaagggctgttgtcatggaaccttctgagcgaagagttcatgctcttgttcag
catcttcagctgataaaaaatgagaagatgaaaaaacggaaactcaaggaggaggagaag
aggaagaaacttgaagcggagagagccaaggatgagcagttgtctaagaaacgcaagaga
gaagagcggagagaaagatatagagagcaagataaactaaagaagaagattcggagacat
gatgtttcctag
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