Carica papaya (papaya): 110821368
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Entry
110821368 CDS
T05151
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110821368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110821368
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110821368
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
110821368
NCBI-ProteinID:
XP_021906873
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MQKRMAVSFPEEVLEHVFSFIRTDKDRNSISLVCKSWYEVERWCRRRIFVGNCYAVNPRM
VIRRFPEVRSVELKGKPHFADFNLVPEGWGGYVYPWILAMATAYPWLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLCSCDGFSTDGLAAIAANCGNLKELDLRECDVDDLSGHWLSQFP
ETCTSLVSINISCLSSEVSFSALDRLVGRCPNLRTLRLNRAVPLDRLASLLRRAPQLVEL
GTGAYSVDAAELRPDVFTKLAGAFSGCKKLKSLSGFWDVVPGYLPAVYSVCSGITSLNLS
YATIQSPDLIKLVSQCPNLQRLLVFDYIEDSGLEALAACCKDLQELRVFPSAPFAAGPNV
ALTEQGLVSVSEGCPKLQSVLYFCRQMTNAALVTIAKNSPNLTRFRLCIIEPRTPDYLTL
EPLDVGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTWAKKLEMLSVAFAGDSDQGLHHVL
SGCDSLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGRKMPRLNVEV
IDEQESPDARPESCPVEKLYIYRTVAGPRFDMPAFVWTMDEESALSLT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagaatggcggtgtcgttccccgaggaggtgctggagcacgtgttctcgttc
attcggacggacaaggacaggaactcgatatcgctggtgtgcaagtcgtggtacgaggtc
gagcgctggtgcaggaggaggatatttgtggggaactgttacgcggtgaaccctaggatg
gtgattagacggttcccggaggtgagatccgtggagctcaaaggaaagccgcacttcgcg
gacttcaacctcgtgcctgaaggttggggcgggtacgtctacccgtggatcctggccatg
gctacggcgtacccgtggcttgaggagatacgtttgaagaggatggttgtcaccgatgag
agtctggagctgatcgccaagtcgtttaagaacttcaaggtccttgtgctctgttcctgt
gatggcttctcaactgatgggctagctgccattgctgctaattgcggaaatctcaaagag
cttgacttgcgggagtgtgatgtggatgatttgagtggacattggctcagccaatttcca
gagacatgcacatctctggtgtccattaatatctcttgcctgagctccgaggttagtttc
tcagccttggaccgtctggtgggcaggtgccccaatctaaggactctccggctcaatcgc
gctgtgcctctagataggcttgctagtctacttcgtcgggcacctcaactggttgagttg
ggcacgggtgcttattctgttgatgctgctgagctgcggccagatgtcttcacaaagtta
gctggagctttctcgggatgcaagaaattgaagagcttgtccgggttttgggatgttgtc
ccaggttacctcccagcagtttattctgtctgctctggaataacatcattaaacttgagt
tatgccactatccaaagccctgatcttatcaagcttgttagccagtgcccaaatttgcag
cgccttttggtgtttgattacatagaagacagtggcctcgaggctcttgcagcttgctgc
aaggaccttcaagaattgagggtgtttccatctgctcctttcgctgcagggccaaatgta
gccttaacagaacagggtcttgtctctgtgtctgagggctgtcctaagctccagtcagtc
ctgtacttctgccgccaaatgacaaatgctgccctagttactattgcgaagaacagccca
aacttgacacggtttcgtctttgtattattgaaccacgaacccctgattatctaaccctc
gagccactcgatgtgggttttggagccattgttgaacactgcaaggatctccggcgccta
tccctttctggtctccttacagaccgtgtttttgaatatattgggacttgggcaaaaaag
ctagagatgttatctgtggcttttgctggagatagcgatcaaggcctccatcatgtgcta
tctgggtgtgacagtctacggaagctagaaatcagggactgcccatttggagacaaggct
cttttggccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctct
gtgagtttcggagcatgtaagctgcttggtcggaaaatgccgcgactcaatgtagaagtt
attgatgaacaggaatctccagacgcgaggccagaaagctgtcctgttgagaagctctac
atatatagaacagttgcaggaccaagattcgatatgcctgcatttgtttggaccatggat
gaagaatccgcattgagtctcacttga
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