Carica papaya (papaya): 110821588
Help
Entry
110821588 CDS
T05151
Name
(RefSeq) uncharacterized protein LOC110821588
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110821588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110821588
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110821588
mRNA degradation factors
5'-3' decay
Decapping complex
110821588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
110821588
NCBI-ProteinID:
XP_021907163
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MLDMENAQELKRWSSNPQPSAHFAEAKPLYRTSSYPQQQPQLHHFSSEPILVPKSTFTSF
PPPGSKSQQASPRHLNIHSLTGGPQSPYSAPNLSPISKSNLHLALLSHGFHYGGNLPQVI
SSGHSFNSRPQNHWVNNAGVLHGDHSGLLHNLLQWQLPHQNGPMSQQLLSAQQQLQQQQR
LHQPVQSSFAHFAALQSQLYNAHPSSTHKMMLGFSDTRDQRPKSSHRGRQNIRFSQQASE
TSCPRSDSGFQFRSKYMTSDEIESILRMQHAATHSNDPYVDDYYHQAQLAKKSSGLRGKH
HFYPSHLKEVSTRGRNSTEHHSHAHVDALGKMPLPSIRRPRSLLEVDSPSGSIDGSSEQK
VSEKPLEQEPLVAARVTIEDGLCLLLDIDDIDRLLQFGKSQDCGSQLRRRRQILLEGLAT
SLQLVDPFSKSGQKVGPTHKDDIVFLRIVSLPKGRKLLSRFLQLLIPGSELTRIVCMAIF
RHLRFLFGGLPSDAQAAETVTNLAKTVSTCIQGMDLHAVSACLAAVVCSSEQPPLRPLGS
HAGDGASLVLVALLERAAEVINPAVSCSSPNDVLWRASFDEFFALLTKYCRSKYETIYTQ
NQGSSDVLDLAIKREMPAELLRASLQHTNEDQRKYLLNFGRKSTPISGSSSHARNSGQIN
SESVRG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatatggaaaatgctcaggagctcaagagatggtcctcgaatcctcaaccttct
gctcattttgcagaagcaaaacctttgtacagaacatcttcgtatcctcagcagcaaccg
caacttcatcatttctccagtgaaccaattcttgtgccaaaatcaactttcacatctttt
ccaccacctggtagcaaatctcagcaggcttcaccacgccacctaaatatacattctctt
actggtggacctcaatcgccttactctgcaccgaatctctctccaatttccaaatctaac
cttcatctggcccttttgtcccatgggttccattatggtgggaatttgccccaagtcatc
tcttctggccattcttttaatagcaggccacaaaatcactgggttaacaacgctggtgtc
ttgcatggagatcattctggcctcttacataatttactacaatggcaattacctcaccaa
aatggcccaatgtcgcaacagttgttatcagctcagcagcagttgcagcagcaacaaaga
ctgcaccaaccagttcaatcatcttttgcccattttgcagcactccagtctcaactatac
aatgcacatccttcatcaacacataaaatgatgcttggattttctgatactagggatcaa
agacctaaatcatcacatagaggcagacaaaatattcgtttctctcagcaggcctctgaa
actagttgtccgagaagtgatagtggctttcaatttaggtccaagtatatgacttctgat
gagattgagagtatccttagaatgcagcatgcagctactcacagcaatgatccatacgta
gatgattattaccaccaagctcaactggccaaaaaatcttctgggttgagagggaagcac
catttttacccatctcacttgaaggaggtttctactcgaggccgtaatagtacagaacat
cattcacatgcccatgttgatgctcttggcaagatgcccctcccttctatacgtaggcct
cgttccctacttgaagtcgactctccatctggttctattgatggaagctcagaacagaaa
gtctccgaaaagcctctagaacaggaaccattggttgcagctagagttaccattgaagat
ggcctttgtcttcttcttgatatcgatgatattgatcggctcctgcagttcggtaagtcc
caggactgtgggtctcagctcaggcggagacggcaaatccttttggaagggttggcaacg
tcacttcaacttgtagatccatttagcaaaagtggccagaaagttgggcctactcacaag
gatgatattgtgttcttgcggatagtgtcacttccaaaggggcgaaagttgctctccagg
ttcctgcagctactcatccctggaagtgagctaactcgaattgtatgtatggctattttc
cgtcacttgaggtttctatttggtggccttccctctgatgcacaagctgcggagacagtc
acaaatcttgcaaagacagtttcaacgtgtattcaaggcatggatcttcatgcagtcagt
gcttgtctagcagcagttgtttgttcttcagagcagccaccactccgaccccttggtagc
catgcgggggatggtgcctctcttgtcctggttgctcttcttgaaagggcagctgaagta
atcaatcctgctgtcagctgtagcagtcctaatgatgtcctctggagggcttcatttgat
gaattttttgcactgcttaccaagtattgccggagcaaatatgaaaccatatatactcaa
aatcagggaagctcagatgttttggatttagctataaagagggaaatgcctgctgagctt
ttacgtgccagtcttcagcacaccaatgaggaccagcgtaaatatttattaaattttggt
cgcaaatccacacctattagtgggtccagctctcatgccaggaatagtggccagataaat
tctgaatccgtgaggggttga
DBGET
integrated database retrieval system
