Carica papaya (papaya): 110822221
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Entry
110822221 CDS
T05151
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110822221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpap04131
]
110822221
Membrane trafficking [BR:
cpap04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110822221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110822221
NCBI-ProteinID:
XP_021907957
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MIADGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLELFFREETRRGCSVIELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSLVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQLEGVDLDMYKEIVLP
KVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLEILLSACPQLQPSVDIKTVLSQLME
RLSSYAASSTEVLPEFLQVEAFSKLNNAIGRVIEIQVDMPIFGAVTLYSSLLKFTLHVHP
DRLDYADQVLGACVKKLSITGKLEDNKATKQIVALLSAPLEKYNNIVTALKLSNYPRVME
YLDSETNKVMATLIIQSIMKNSTHISSADKVEALFELIRGLIKDLDETRHDEVDEDDFNE
EQNSVARLIQMLHNDDVEEMFQIISTVRKHIMTGGPKRLPFTIPPLVFSALKLIRRLQGQ
DENPFGEEASASPKKIFQLLNQTIETLSNVPAPELALRLYLQCAEAANDCELEPIAYEFF
TQAYILYEEEISDSKAQVTALHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDEMKDGERVLLCLKRALRIANAAQQMANATRGNTGSVTLFVEILN
KYLYFFEKGNPHVTVASIQSLIELIMTEMQSDSSTSDSAADSFLACTLRYIQSQKKKGGA
IGEKYEPIKA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggggtagaggacgaagagaaatggctcgccgcaggaatcgccggcctc
caacagaatgctttctatatgcatcgcgctctggactcgaacaatctcagagatgctttg
aagtattccgctcagatgcttagcgagctacgaacgtcgaagctttctcctcataaatac
tacgaactctatatgcgagcctttgatgaattgaggaaactagaattgttctttagggaa
gagacgcggcgtggctgctcggtaattgagctgtatgagctagtgcagcacgcgggtaac
atattgcctagattgtatctcctctgtactgtaggatctgtatatatcaaatctaaagaa
gctcctgctaaggatattcttaaggatctggttgaaatgtgtcgtggtattcagcatcct
ttacgtggtctatttttgaggagttatctttctctagttagtagagataaattgcctgat
attggttccgagtatgaaggggatgctgacacagtcatggatgctgtggagtttgtgcta
caaaactttacggagatgaacaaactatgggtccggatgcaacatcaggggcctgcccgg
gaaaaggagaagcgggagaaggaaaggagcgagcttcgtgatcttgttggcaagaacttg
catgttctgagtcagttagaaggagttgaccttgacatgtacaaagaaattgtgcttcca
aaagtcctggagcaggttgtcaattgtaaagatgagcttgctcagttttacctgatggat
tgcataattcaagtctttcctgatgagtaccacctgcaaactcttgagatattgttgagt
gcctgcccacagcttcagccatccgttgacatcaagacggttctatctcagttgatggaa
aggctttccagttatgccgcctcaagtacagaagtgttgcctgagttcttgcaagtagaa
gccttctcaaagttgaataatgccatcgggagggtgattgaaatacaagttgacatgccc
atttttggagctgtaacgttgtattcctctcttcttaaatttactctccatgtccatcct
gatcgacttgattatgcagatcaagtattgggagcatgtgtgaagaagctgtctataaca
ggaaagcttgaagacaataaagcgacaaaacagattgttgcacttttaagtgctccgctg
gagaagtataacaatattgtcactgccttgaaactttcaaactatccccgagtcatggaa
taccttgacagtgagacaaataaagttatggcaacgcttattattcaaagcattatgaaa
aacagtacccatatttcttcagctgacaaggttgaagcattgtttgaattgataagaggg
cttattaaggatttggatgagacacgtcatgatgaggttgatgaagatgatttcaatgag
gagcagaattccgttgcacgtctcattcagatgttacataatgatgatgtggaagagatg
tttcagataatatctactgtaaggaagcacatcatgaccggtggaccaaaacggctgcct
ttcactattcctcctcttgttttttctgctttaaagctaattaggcgactgcagggccaa
gatgaaaatcccttcggggaggaggcatcagcttccccaaagaaaatttttcagctttta
aatcagactattgagactctctctaatgttcctgcaccagaattggcgttacgattgtat
ttgcaatgtgctgaggctgcaaatgactgtgagttagaacccattgcatatgaatttttc
acccaggcatatatattatatgaagaagaaatttcagattccaaagctcaggtgactgcg
ttgcacttaataataggaaccctccagaggatgcatgtttttggcgtcgaaaacagggat
actttgacacacaaagccacagggtactctgcaaagcttttgaagaagcctgatcagtgt
agagctgtttatgcttgctcacatctcttctgggttgatgatcaggatgagatgaaagat
ggagagagggtcctcctttgtctcaaacgggcactaagaattgcaaatgctgctcagcaa
atggccaatgcaacacgtggcaacactggatcagttactctctttgttgagatactgaac
aagtacctctattttttcgagaaaggtaatccacatgtcactgttgcttcaatccagagc
ctgattgaattgattatgaccgagatgcagagtgattctagcacatccgattcagctgca
gattcattcttggcttgcacactgcgttacatacaatcccagaaaaagaagggaggtgca
ataggtgaaaagtacgaacctatcaaggcatga
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