Carica papaya (papaya): 110822252
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Entry
110822252 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110822252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110822252
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110822252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
110822252
NCBI-ProteinID:
XP_021908004
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MDADAKFADSLDLKVTELLKEVQFDYSSAFTKLVDDTVSSIKEVIDNIPENFQVTGDLAP
GFVSDISADKVEFNFKKPKSVEIGGSYAIRCIAKPHATVDLLVRMPKECFNEKDYLNYRY
HAKRCLYLCVIKKHLMSSSPIQKVEWSTLQNEARKPVLVVYPVKTLADVPGFFVRIIPTA
TSLFNVSKLNLKRNNVRALNQGGDPLPTPKYNSSILEDMFIENNAELLKKNFLGWKELRE
ALILLKIWARQRSSIYSYDCLNGFIISILLSYLATQDKINCSLKAFDIFRVGLDFIATSK
LWERGLYFPPQDQNRVPKEEKKQQRESFPVVICDSSTHMNLAFRMTRIGFLELQDEAALT
LKCMTNCRDGGFEEIFTMKIDYPAKYDYCIRLNLRENRQVYASGFCLDDECWRLYEQKVH
NLLCQGLGDRAKLIRVIWRNSIAEWNVEDGLSTLDRSPLLVGISISSIEKAFRVVDIGQN
AENKEEALKFRRFWGEKAELRRFKDGTIAESTVWETEQWSRHLILKKIVEYVLLRHLSLS
KENIVQIVDQLDFSLIYGAKDPVSCSGALIGAFELLSKRLRLIDDIPLGVSSVQPLDSAF
RFTSVFPPEPHPLAREKVDTSRLHKLPQSCIQALDVMIQLEGSGNWPMDDLAIEKTKSAF
LLKIAESLQNSWGITCSATEDNVVVFMSGYAFCLKIWHERGLNLVKKETGNGPVKRVPSM
DRKLFLCSQHASMINGLQGRYPVYGPVVRLAKRWVSSHLFSACLAEEAIELLVAYLFLKP
FPFTVPCSRITGFLRFLRLLAEYDWTFSPLVVDINNDLSRNDEKEINDNFMSSRKANEEN
KQNINAPMFLTTSYDKASEAWTSFSPNSLELKRLVAYARSSTNLLSNLVLHDQSDSYGWE
CLFRTPLNNYDAIILLHRDKLPYPQRLLFPSELNQGSHVAHGKASKSFHHFILPGDLKTS
SEELKSKLMVNFDPLMSFAGDLEKEFITLKLWYDSLGGDAIGLTWDGTYSKKRERDEEGG
EGKYPIDVLKAVGEIGKGFVREIYLLKAPRLMK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatgctaaattcgcagactcgttggacttgaaagtgacagagctgctcaaa
gaggtccagttcgactacagttctgctttcaccaaactcgtcgatgacacagtttcatcg
attaaagaagtaatcgataacatccccgaaaattttcaggtcacgggggatttggctccg
ggttttgtaagcgatattagcgcagataaagtagaattcaactttaagaagccaaagtca
gttgaaatcggtggtagttatgcaatacgttgcattgcaaagcctcatgccactgtagat
cttttagttcgtatgccaaaggaatgtttcaatgagaaagactatctaaattaccggtac
catgccaaaagatgcctttacctatgtgtaattaagaaacatttgatgtcatcttccccc
attcagaaggttgagtggtctaccctacagaacgaggctcgcaaacctgttttagtagtc
tatccggtcaagacattggctgatgttcctgggttttttgtgaggataattcctacggca
acatcattgtttaatgtttcaaaattgaatttgaagcgaaacaatgtccgagcgctaaat
caagggggtgatcctctacctaccccaaagtataatagtagcattttggaagacatgttt
atagagaacaatgcagaacttctaaagaaaaacttcttggggtggaaggaactgagagag
gctttaattctgctgaagatttgggctcggcagagaagttcaatatattcctatgattgc
ttaaatgggtttataatctctattttactttcctaccttgcaactcaagataagattaac
tgttccttgaaggcatttgatatatttagagttgggttggacttcattgccacttccaaa
ttatgggagcgagggctttattttccaccacaggatcagaaccgcgttccaaaggaggaa
aagaagcaacaaagggaatcatttccagtggttatatgtgattcttctacacatatgaat
ttggctttccggatgaccagaattggattcttggagctccaagatgaggctgctttgaca
cttaaatgcatgacgaattgtagagatgggggctttgaagagattttcacgatgaagatt
gactatcctgcaaaatatgattattgcataagattgaatctcagggaaaatcgtcaggtc
tatgcatcaggattttgtttggacgatgaatgttggagattgtatgaacagaaagttcat
aatctgctatgtcaagggttgggagatagagcgaaattgattcgtgttatctggagaaat
agtatcgctgaatggaatgtagaagatggtttatcaacacttgatagatcaccattactt
gttggaatttctataagctccatagagaaagcctttagggtggttgatatcgggcaaaat
gcagaaaacaaagaagaggctctgaagttccggaggttttggggtgaaaaggcagagctt
cggagatttaaagatggtaccattgccgaaagcacagtatgggagactgagcaatggtca
aggcatcttattttgaaaaaaatcgttgagtatgtacttctgcggcatctttctctctct
aaagagaacattgttcaaatagtggatcagcttgacttttctttgatatatggtgccaaa
gatcctgtatcatgttctggagctttaattggggcatttgaacttctttcaaagcgcttg
cggcttattgatgatattcccttgggagtatctagtgttcagcctttagattcagctttc
aggtttacatctgtcttccctcctgaacctcatccactggctagggagaaggttgataca
tcgaggctgcataagctccctcagtcctgtattcaggcactggatgttatgattcagttg
gaaggttctggtaattggccaatggatgatttggcaattgagaaaactaaatctgctttc
cttcttaaaattgcagagagtcttcaaaatagttgggggataacatgttctgcaactgag
gataatgttgttgttttcatgtccgggtatgcgttttgccttaagatttggcacgagaga
ggcctgaatttggtgaagaaagaaactggaaatggtccggtgaagagggttccttcaatg
gatcggaaactgtttctttgtagtcagcatgcgagcatgatcaatggattgcagggtcgt
tacccagtgtatgggccagttgttaggcttgcaaaacgctgggtttcttcacatctcttt
tcggcttgcttagcagaggaggctattgaactgttggttgcttacctctttttgaagcct
tttccatttactgttccttgctcacgtatcactggatttttaaggttcttgcggctatta
gcagaatatgattggacgttttctcctctggttgtggacataaataatgatttgagcaga
aatgatgagaaagagataaatgataatttcatgtccagtagaaaggctaatgaggaaaat
aagcaaaatataaatgcaccaatgttcttgactacgtcttatgacaaggcatctgaagct
tggacaagtttctcgccgaactcattggagctcaagaggttggtggcttatgctcgaagc
agtacgaacttgttgagtaatcttgtattacatgaccagagtgattcttatggatgggag
tgtcttttccggacacctttaaacaactacgatgcaataattcttctccacagggacaaa
ttaccttatcctcaacgtcttctcttcccatcagagctgaaccaagggagtcatgtggct
catgggaaagccagcaagagttttcatcacttcatattacctggagatttaaagacgagc
tctgaggagttgaaaagtaagctcatggtgaactttgatcctctgatgtcctttgctggg
gatttagagaaagagttcattacattgaagctgtggtatgattctctgggtggtgatgct
atcggtctaacatgggatggaacttattcaaagaaacgagaaagagacgaagaaggtgga
gaggggaaatatcccattgatgttctaaaagctgtgggtgaaattgggaaaggttttgtg
agagagatttatttgctcaaagctcctcgtctcatgaaataa
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