Carica papaya (papaya): 110822380
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Entry
110822380 CDS
T05151
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110822380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110822380
03009 Ribosome biogenesis [BR:
cpap03009
]
110822380
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110822380
Spliceosome [BR:
cpap03041
]
Complex A
U1 snRNP components
U1 related factors
110822380
Complex B
110822380
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
Helicases
110822380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
110822380
NCBI-ProteinID:
XP_021908181
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MAATATVPSSGPRYAPEDPTLPKPWRGLVDGRTGYLYFWNPETNVTQYERPQSSAPPPKS
SFAPISSSLQVQQPSHGQPGREDDRYGRGSNGGSKMEGGLRLNQRVGSFHSHDIPNGLAN
VAHGGSSARGNGPSTAGTGLSTEAYRSRHEITITGDQVPPPFMSFEATGFPPEILREVHG
AGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRCRNNPQLGPTVLV
LSPTRELATQILDEAVKFGKSSRISCACLYGGAPKGPQLRDIERGIDIVVATPGRLNDIL
EMRRISLDQVSYLVLDEADRMLDMGFEPQIRKIVKQVPAKRQTLMYTATWPKEVRKIAAD
LLVHPVQVNIGNVDELVANKSITQCVEVLAPLEKHRRLEQILRSQEPGSKIIIFCSTKKM
CDQLARNLVRHFGAAAIHGDKSQSERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRMVI
NYDFPTGVEDYVHRIGRTGRAGATGLAYTFFSDQDAKYASDLIKVLEGANQRVPPEIREM
ASRSGGMGRPRRWGPSSGGRGGRSDLGYGGRDSGRGRWGPYSSSSSRQERGGGRGYDSES
RDRYERGYNNGYDRARSSRSPDRGSGRGDRAKISRERSFSPDRYDKASAARSPARSFHEM
MMKRGRSPQRQRICVNSRSPSRERSRSPHGGARREKGSYNHDNYREWKRSPDGGTAGGKN
PSNYGEEEEGLIPADGNSRNPPDVDRAAE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactgcaactgtcccttctagtggtccccgatatgcacctgaggatcccact
ctccccaagccatggagaggtctggttgatggtagaactggatacctttacttctggaat
ccagagaccaacgtcactcagtatgaaaggcctcaaagctcagctcctcctcccaagtct
tcttttgcacctattagttcttcactgcaagttcaacaaccttcgcatggacagcccggc
agggaggatgataggtatggaagaggcagcaatggtggatccaagatggaaggagggttg
aggttaaatcagagggttggatcatttcattctcatgatatcccgaatggtttagcaaat
gttgcacatggaggatcctctgctagaggaaatggtccatcaactgcagggactggtttg
tccacagaggcttatcgttctcggcatgaaataactattactggagatcaggtgcctccg
cctttcatgtcttttgaagctactggttttccacctgagattcttagagaggtacatggt
gccggattctctgccccaactccaattcaagcacagtcatggccaatcgcattgcaaagt
agagatatagtggccattgctaaaacagggtctgggaaaactttgggttacttgattcca
ggcttcatacatctcaaacggtgccgcaataatcctcaattgggtcccactgttttggta
ttgtcaccaacaagggagttggcaacgcaaatactggatgaggccgtaaagttcgggaag
tcatcaagaatatcttgtgcgtgtttgtatggaggtgcacccaagggtcctcaacttaga
gatatagaaaggggaatagatatcgtggttgcaactcctggccgtttgaatgacattctt
gagatgaggagaatcagcctagaccaagtttcttacctcgtgctagatgaggctgatcgg
atgttagatatgggttttgagcctcaaatacggaagattgtgaagcaggtgcctgctaag
cgacaaacgctcatgtacactgctacatggccaaaggaagttcggaaaatagcagcagat
ctacttgttcatcctgttcaggttaatattggcaatgttgatgagctcgtggcgaacaag
tctatcacacagtgtgttgaagttttggcacctttggaaaaacatcgacgattagagcag
atattgcgttctcaggaaccaggttccaagataattattttctgttcaaccaagaagatg
tgtgatcaactagccagaaaccttgtgcgtcattttggagctgctgctattcatggagac
aaatcgcagagtgagagggatcatgtgttgagtcaatttcgcactgggaggtctccagtg
cttgtggcaactgatgttgctgctcgtggactggatattaaagacatcaggatggttatc
aactatgactttccaactggagtagaagattatgttcacaggatcgggagaactggaagg
gctggtgccactggactggcttacacattcttcagtgaccaggatgcaaagtatgcttcg
gatcttatcaaagttttggaaggggcaaaccaaagagttcccccagagattcgcgagatg
gcctcacggagtggtgggatgggcaggcctcgtcgttggggcccaagtagtggtggccgt
ggtggacgtagtgatttaggatatggtggaagggatagtggtagaggtcgctgggggcct
tattcttcgtcttctagccggcaagaaagaggtggaggccgtggctacgacagtgagtca
cgtgacaggtatgagcgtggttataataatgggtatgatagggctcgtagtagtcggagc
cctgacaggggatcaggtcgaggtgaccgtgctaagatctcacgagagcgcagcttcagc
cctgacaggtatgacaaggcttcagcagcacgatccccagcacgaagttttcatgagatg
atgatgaagcgtggtcgatcacctcaacgccagcgtatatgtgtgaattcacgtagtcca
agtcgggaaaggtcacgatcacctcatggtggtgcaaggagggaaaaaggatcatacaat
catgataattatagggagtggaagagatcacctgatggtggcactgctggcgggaaaaat
ccatcgaattatggtgaagaggaggaaggcctgattccagcagatggaaacagtaggaac
cctccagatgtagatcgagctgcggagtag
DBGET
integrated database retrieval system
