Carica papaya (papaya): 110822616
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Entry
110822616 CDS
T05151
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110822616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110822616
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110822616
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110822616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110822616
NCBI-ProteinID:
XP_021908455
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MLVLPKSNSIQIREVWNENLEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGNFKNSYDY
HYQTLKDNVDMLKLIQLGLTFSDEYGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL
LHQSGIDFKKNNEMGIDARRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLP
DTQVGFFNLIKMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGISHQAGSDSLLTA
CTFRKLKENFFSGSVEKYAGVLYGLGVENGLVLVSEK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgctaccgaaaagcaattccattcaaattcgcgaggtttggaatgaaaatctg
gaggaagagttcgcgttgattcgtgagattgtcgatgattatccttacgttgcaatggac
accgagttcccagggatcgtcttgcgtcccgtggggaatttcaagaacagctatgactac
cattatcagaccttgaaggacaacgttgatatgctcaagttgattcagttaggtctcaca
ttttcagatgagtacgggaatttaccaacttgtggaaccgacaagtattgcatctggcaa
ttcaacttccgtgaatttaatgtcaatgaggatgtctttgctaatgactctatcgagctt
ttgcaccaaagtgggattgacttcaagaagaacaatgagatgggtattgatgcaaggagg
tttggggagcttttgatgtcttcagggattgtattgaatgatagtgtgcattgggttacc
tttcatagtggatatgattttggatatttgctcaagctcttgacctgtcagaatttgcct
gatacacaagttgggttctttaatctgatcaagatgtattttcctactctttacgacatc
aagcacttgatgaagttctgcaacagcctgcatggtggtttgaacaagcttgctgagttg
ttggaagttgaaagggttggcatttctcatcaagcaggttctgatagtctgctcacagcc
tgcactttcaggaagctgaaagaaaatttctttagcgggtctgtggagaaatatgcaggc
gtgttgtatgggttaggcgtggagaatggactagtccttgtaagtgaaaaataa
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