KEGG   Carica papaya (papaya): 110822628
Entry
110822628         CDS       T05151                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03020  RNA polymerase
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110822628
  09124 Replication and repair
   03420 Nucleotide excision repair
    110822628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpap03021]
    110822628
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110822628
Transcription machinery [BR:cpap03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110822628
  RNA polymerase III system
   RNA polymerase III
     110822628
  RNA polymerase I system
   RNA polymerase I
     110822628
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110822628
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NotI
Other DBs
NCBI-GeneID: 110822628
NCBI-ProteinID: XP_021908470
LinkDB
Position
Unknown
AA seq 236 aa
MVETAGEGLEEERNNSGREAETVLGPCLCNYVDQGSTESHRYYLSRRTALEMLKDRGYEV
AVSEIDLSLEEFRAVHGQNPDVERLRFSVHHRSDPSKRILVIFCGTGVVKVNTIRSIASQ
IVNKGSLTGLILIVQNHITSQALKAIDLFSFKVEIFQITELLVNITKHVLKPKHRVLTDK
EKKNLLKKYSIVEKQLPQLLKKDAIVRYYGLEKGQVVKVTYDGEITGEHFTYRCVS
NT seq 711 nt   +upstreamnt  +downstreamnt
atggtagagacggccggggagggacttgaggaagaaaggaacaacagtggaagagaagca
gaaacagtgctagggccctgcttgtgcaattacgtggaccaagggagcaccgaaagtcac
aggtactacctgtcgcgtagaacagcgttggagatgctgaaagacagaggctatgaagtc
gctgtctccgaaatcgatctatctcttgaagaattcagggccgttcatggtcaaaacccg
gatgttgagcgtctccgtttctcggttcatcatcgatcagatccttccaaacggatcctg
gttatcttttgtggaactggtgtcgttaaggttaacacgatccgcagtattgcaagtcaa
atagttaacaaagggagtttgactgggctgatattaattgtgcaaaatcatataacgagc
caagcactgaaagctattgatcttttctcatttaaggtcgagatattccagataactgag
ttgcttgttaatatcacaaagcatgtgttaaagccaaagcatcgggtattaactgataaa
gagaaaaaaaatcttctgaagaagtatagtatagtagaaaaacagcttcctcagctgtta
aagaaagatgcgattgtgcgatactatggacttgaaaaaggtcaggtagtgaaggtaact
tacgatggggaaatcaccggggagcatttcacttatcgatgtgtctcttga

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