Carica papaya (papaya): 110822709
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Entry
110822709 CDS
T05151
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110822709
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110822709
Spliceosome [BR:
cpap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110822709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
Helicase_C
Ski2_cyano_M
Hydrophobin_like
GOLM
Motif
Other DBs
NCBI-GeneID:
110822709
NCBI-ProteinID:
XP_021908573
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MAETFAEEAVRRIGWRRWGVREIYEREREEVVCGECEHRGKVTERKRSEQLACVGKSEMT
KGVVCRSGGAERVASGMSRRNEFGECPVRGRLMEPYGEVGLAKDKNVVAGDWDGIGGDYR
IHGKTELVTSSRRPVPLTWHFSTKTYLLPLLDEKGTRMNRKLSLNYLQLSASEVSSYELN
GSKRRTSRKRRGDMSYNSLINIPGQSLSKNDINRIRRSQVPQVIDTLWHLKTRDMLPAIW
FIFNRRGCDAAVQYVENCDLLDDCEKSEVELALKRFRIQYPDAVREIAEKGLLEGVAAHH
AGCLPLWKSFIEELFQRGLIKVVFATETLAAGINMPARTAVISSLIKKAGSERIQLSPNE
LLQMAGRAGRRGIDKRGHVVLVQTPYEGAEECCKLLFAGVQPLVSQFTASYGMVLNLLAG
AKVTRRSSEPGESVALQAGRTLEEARKLVEQSFGNYVGSNVMLAAKEELAKIEDNIEMLT
SEITDEAIDRKSRKLLSAAAYREIADLQEELKAEKRLRTELRRRMEFKRLVALKPLLKKM
EDGHLPFLCLRYKDSEGVENIVAAVYLANVDSLNGSKLKKMLSDDDFFALNVAEAKLMAD
ETQTIEPSYYVALGSDNCWYLFTEKWIKTVYRSGFPNVALADGDALPREAMSILLDKEGM
QWDKLAGSEFGGLWCMEGSLETWSWSLNVPVLSSLSENDEVSHISQEYSDAIERYKEQRT
KVARLKKKIARTEGFKEYKKIIDVRKLTEEKIRRLKTRSSRLISRLEQIEPSGWKEFLQI
SNVIHESRALDINTQLIFPLGETAAAIRGENELWLAMVLRNKVLLELKPAQLAAVCASLV
SEGIKVRAWKDNNYIYEPSTTVINVIHFLEEQRSSLLLLQEKHRVEIPCCLDSQFSGMVE
AWASGLNWREMMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPQLQHNATLAANVMDRP
PISELAG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacgttcgcggaggaggccgtgagaaggataggatggcgtcgttggggcgta
cgggagatctatgagagagagagagaggaggttgtgtgcggtgagtgtgagcaccgaggg
aaggtcactgagaggaagaggagtgagcagttggcgtgtgtggggaaatccgagatgacg
aagggagtcgtgtgcaggagcgggggtgcggagagagtcgcgagcggaatgagcaggagg
aacgaattcggtgagtgtccggtgagagggaggcttatggaaccgtacggagaggtcggt
ttagcgaaggataagaacgtagttgctggagattgggatggcataggaggggactataga
attcatggtaaaactgagttggtgacatcatcaaggcgtccggttccgttgacgtggcac
ttctcaacaaagacttatttgttacctctccttgatgagaaaggaacacgcatgaatagg
aagctgtctctcaattatcttcaactttctgcttcagaagttagttcttatgagcttaat
gggtctaaaaggaggacttcaagaaaacgtcgaggagatatgagctacaatagtttgatt
aatattcctggacagtctctttccaagaatgacataaacagaattcgtcgctcgcaggtt
cctcaagttattgacacattatggcaccttaagacacgggatatgctgcctgcaatttgg
tttatttttaacaggagaggatgtgatgcagctgtgcagtatgttgaaaactgtgatctg
ttagatgactgtgagaagagtgaggtcgaattggccctaaagaggttccgtatacagtat
cctgatgctgtcagagaaatagctgagaaagggcttttggaaggggttgctgcacaccat
gctggctgtttgcccttgtggaaatcatttattgaagagttgttccaacggggactcatt
aaggttgtctttgcaacggaaacacttgctgctggaatcaatatgcctgctaggacagct
gttatttcatctcttattaaaaaggctggtagcgaacgcatccagttaagcccaaatgaa
ctgcttcaaatggcagggcgtgccggacgcaggggcattgataaaagaggccatgttgta
ctggtccagactccttatgaaggtgcagaggagtgctgcaaacttctatttgctggagtc
caacctcttgtatcacagttcactgcttcctacggaatggtgctgaatcttctagcaggt
gcaaaagttactcgtagatcaagcgaaccaggtgaaagtgtagctttacaagcagggcga
actttggaagaagctaggaagttagttgagcaaagttttgggaactatgtgggaagcaat
gtcatgcttgctgcaaaagaggagcttgctaaaatagaggataatattgaaatgctaact
tcagagattactgatgaagctatagatagaaagagcaggaaacttctatcagcagcagca
tatagggagattgcagatctgcaggaagaactaaaggcagaaaaacgccttcgaacagaa
ttgcgaagaaggatggaattcaagagacttgttgcactgaaaccgttgttaaagaagatg
gaagatggacacttgccttttttatgcctacgttataaagattctgaaggagttgaaaac
atagtagctgctgtttatttggcaaatgttgactcactcaatggttcaaagctgaagaaa
atgctttctgacgatgatttttttgcactaaacgtagctgaggctaagttaatggctgat
gaaactcaaactattgagccatcttattacgttgctctcggttcagataactgttggtat
ttgtttacagaaaagtggattaaaactgtttataggagtgggtttcctaatgttgcttta
gcagatggtgatgctttacctcgggaagctatgagcatacttcttgacaaggagggaatg
cagtgggacaagcttgctggctctgaatttgggggtttatggtgtatggaaggatctctg
gaaacatggtcctggagtttaaatgtccctgttttaagcagtctttctgaaaatgatgaa
gtctcacatatatcacaagaatatagtgatgctatagaacgttacaaggaacaacggact
aaagttgcacgtttgaagaaaaagatagcccgtacagaaggctttaaggaatataagaag
atcatagacgtgagaaagttaacagaagaaaaaataagacggttgaagactagatcaagt
cgtctaataagtcgactagagcaaattgagccatcaggttggaaggagtttttgcaaatc
agcaatgttatacatgaaagtagagcgttggacattaacacacagttaatattccctctt
ggtgaaactgctgctgcaattcgtggcgaaaatgaactctggctggcaatggttcttcga
aataaagtcttgctagagttaaagcctgcacaacttgctgctgtctgtgcaagtttagtt
tctgaaggcataaaggttcgtgcttggaaggataacaattacatatatgaaccttcgact
accgtaattaatgttattcatttcttggaagaacaaagaagctcccttctgctacttcaa
gaaaaacacagggtagagataccttgttgtttggatagccaattttctggtatggttgaa
gcctgggcttctggactgaattggagagagatgatgatggactgtgcaatggatgagggc
gatctcgctcgcctcttacggcgtacaattgatctattggctcaaattcctaaactgcct
gatattgatccacaactgcaacataatgcaacattagctgcaaatgtgatggaccgtcca
ccaataagcgagttagctggatga
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