Carica papaya (papaya): 110822759
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Entry
110822759 CDS
T05151
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110822759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110822759
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110822759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
ASA1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_Aladin
CFAP251_N
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IP5PC_F
PAC11
Beta-prop_NWD2_C
WDR54
Beta-prop_HPS5
Beta-prop_ACSF4
CDtoxinA
Beta-prop_LRRK2
WD40_like
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
KNTC1_N
Beta-prop_WDR35_TULP_N
PROPPIN
Rhamnogal_lyase
Utp13
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
110822759
NCBI-ProteinID:
XP_021908641
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MVKAYLRYEPAAAFGVIVSVESDITYDSTGKYLLAPALEKVGVWHVRQGVCTKFLTPSPS
ARAHSPAVTSIASFPSLVASGYADGSIRIWDFDKGTCETTLNGHKGAVTALRYNKLGSLL
ASGGKDNDIILWDVVGETGLFRLRGHRDQVTDLVFLESGKKLVSSSKDKFLRVWDLETQH
CMQIISGHHSEIWSIDVDPGERFLVSGSADLELRFYTVKDHLLGGSSISNTNENKSESNG
DLSTQNKWEVLLQFGEIQRQSKDRVATVRFNNSGNLLACQVAGKTVEIFRVLDEAEAKRK
AKRRLHRKEKKSAKGAVEETENGDASLGTEEAGSIPVVTVPDVFKLLQTVRASKKVCSIS
FCPITPKNSLATLALSLNSNLLEFYTIESNANKKSLAIELEGHRSDVRSVTLSADNTLLM
STSHNAVKIWNPSTGACLQTIDSGYGLCGLIVPHKKYALVGTKSGKLEIIDIGSGTCIEA
VDAHGGSVRSIAAIPNENGFVTGSADHDVKFWEYQIKKKPGQDSKQLTVSNVRSLKMNDD
VLVVAVSPDAKYIAVALLDCTVKVFFMDSFKFFLSLYGHKLPVLCMDVSSDGDLIVTGSA
DKNLKIWGLDFGDCHKSIFAHTDSVMAVQFVHNTHYMFSVGKDRLVKYWDADKFELLLTL
EGHHADVWCLAISSRGDFVVTGSHDRSIRRWDRTEEPFFIEEEKEKRLEELFESDIDNAF
ENRYALKEEIPEEGAVGVAGKKTQETLSATDSIIDALDVAEVELKRLAEHEEEKTRGQPT
EFQPNVIMLGLSPSDYVLRAISNVNTNDLEQTLLALPFSDALKLLNYLKDWIPNPDKVEL
VCRLATVLLQTHHSQLVCTPAARPLLTVLKDILYARVKECKDTIGFNLAAMDHLKQLMVS
RSDALFQDAKSKLLEIRSQQSKRLEARTETKTERKKKKQQKK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcgtacctaaggtacgagccggcggctgctttcggcgttatagtatcggtg
gagtccgacatcacatacgactccaccggaaagtatctgctagctccggcgctcgagaag
gtcggcgtgtggcacgtccggcaaggcgtctgcaccaaattcctaactccttctccttcc
gcgcgagctcactctcctgctgtcacctcgatagcctcctttccttctctggtggccagt
gggtatgcggatggtagtataagaatttgggattttgacaaaggaacctgtgagaccacg
ttgaatgggcataagggagctgtgactgcgctaaggtacaataagcttggttctcttctt
gcatctggaggcaaagacaatgatattatattatgggacgttgttggtgagactggcctt
tttcgtcttcgtgggcatcgagaccaggttacggatcttgttttcttggaatctggtaaa
aagcttgtttcctcctccaaagacaaattcttgagagtgtgggatcttgaaacccagcat
tgtatgcaaataattagcggtcatcatagcgagatttggtccatagatgtggaccctgga
gaaagatttctggtcagtggctcggcggacctggaacttcggttttacactgttaaagat
cacttgctgggtggatcttccatttctaatacaaatgaaaacaaaagtgagagtaatgga
gacttgtcaactcaaaataaatgggaagttttgctgcagtttggtgaaattcagcgacaa
agcaaggatagagttgcaactgttaggttcaataattcaggaaatttgctggcttgtcaa
gtggcagggaagacggttgagatattccgggtacttgatgaagctgaggcaaagcgtaaa
gcaaaacgtaggcttcacagaaaggagaagaaatctgcaaagggagcagttgaagaaact
gaaaatggagatgcaagtcttggaactgaagaagctggaagcattcctgtggttacagtc
cctgatgtttttaagcttcttcaaactgttcgagctagcaaaaaagtttgttccatttcc
ttttgtccaattactcccaagaattcactagctactttagcattgtctttgaacagtaac
ttattggagttttacaccatcgaaagcaatgcaaataaaaaatcacttgctattgaactc
gagggacaccgttctgatgtcaggagtgttaccctaagtgctgacaacactcttttgatg
tcaaccagtcacaatgccgtaaagatatggaatccaagtactggtgcttgtcttcaaact
attgattctgggtatggattatgtggtttaattgttcctcataaaaagtatgctcttgtt
ggaaccaagagtggaaaattagaaattattgacatcgggagcggcacttgcattgaagca
gtagatgctcatggcggctctgtcagatccattgctgccattccaaatgaaaatggtttt
gtcactggaagtgcagatcatgacgttaaattctgggaataccaaatcaaaaagaaacct
ggtcaagattctaagcaactcacagtctcaaatgtgaggtctttgaagatgaatgatgat
gtgttagtggttgctgtcagtcctgatgctaagtatattgctgttgctctacttgattgc
acagtaaaggttttctttatggattccttcaaatttttcctttccttgtatggtcacaag
ctacctgttctctgtatggatgtttcatcagatggagatttgattgtgactggttctgca
gacaaaaatttgaagatttggggtttggattttggtgactgtcataaatcaatttttgct
cacactgacagtgttatggcagtacagtttgttcacaatacccattacatgtttagcgtg
gggaaagatcgccttgtcaaatattgggatgctgataagtttgagttgcttttaactctt
gagggacatcatgcagatgtttggtgtctggcaattagcagccgtggagactttgtggtg
acaggatctcatgacaggtctattcgccgttgggatcgtactgaagaaccatttttcatt
gaggaagagaaggaaaagaggttggaggagctgtttgagtctgacattgacaacgcattt
gaaaacaggtatgcccttaaggaagaaattccagaggagggtgctgtaggtgtagcagga
aagaagactcaagaaacccttagtgcaactgattcaatcattgatgcattagatgttgca
gaagtggagttgaagcgtcttgctgaacatgaggaggagaagacaaggggacaacccact
gagttccaaccaaatgttatcatgcttgggctatctccatctgattatgttctccgtgcc
atttcaaatgtaaacacgaacgatctggagcagaccttgctggctttgccattctctgat
gcattgaagcttctcaattacttgaaggattggattccaaatcctgataaggttgagctt
gtttgcaggttggcaacagtgttattgcaaacacatcatagtcagttggtttgcactcca
gctgccagaccattgttgacagttctcaaagatatcctttatgctagagtcaaggaatgc
aaagatacaattggctttaatcttgctgcaatggaccatctgaagcaattgatggtttca
agatctgatgcgctctttcaagatgccaagtcaaaactactagaaatccgttcacaacag
tcgaaacgattggaagcaaggacagagacaaaaacagaaagaaagaaaaagaagcagcag
aagaaatga
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integrated database retrieval system