Carica papaya (papaya): 110822782
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Entry
110822782 CDS
T05151
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110822782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110822782
03036 Chromosome and associated proteins [BR:
cpap03036
]
110822782
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110822782
Coactivators
SAGA/TFTC/STAGA complex
110822782
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110822782
STAGA complex
110822782
TFTC complex
110822782
SAGA complex
110822782
SLIK complex
110822782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
110822782
NCBI-ProteinID:
XP_021908688
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAIGVPAAQHPSPSPPNSQPSAFSGSFGQQFGGLGRSGVNVPESASNANVSQPRPMQGIQ
GMGMMGTLGSSSQMRPGGISAHHQQRPVQSTLRPPSSPTSQPSGTQNFQGHSLLRVSSVG
SPASSAPNMQSLNQPWLSSGAQGKPPLPPPSLRLQMNSPSIQPRSHTPQQHHSLPPASQA
QQQHMSSAQPQQNLPSHQPQEHFGQQLPSRTPQTSPLQQQVMRVQGSASQKPSSLAISQP
NPLQPAALSKSAIAESNDSGGRILSKRSIHELVSQIDPSEKLDAEVEDILVDIAEDFVDS
ITTFGCSLAKHRKSDTLEAKDILLHLERNWNMSLPGFGGDEIKTYRKPHVTDIHKERLAV
IKKSIIAAEVTNTKNFVGQGVTNVKGNLAKAPVNIIGSPNFKAREVT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccattggtgtgccggcagcacagcacccgagcccttctcctcctaattcgcagcca
tctgcgttttcaggttcttttgggcagcagttcggcgggctgggccgaagtggagtcaat
gtgcccgaatccgcgtctaatgccaacgtttctcagccaaggccgatgcaaggaatacag
ggaatgggaatgatgggaacgctgggttccagttctcaaatgcgaccaggtggaatttca
gctcaccatcaacagagacctgttcaatcaactcttagaccgccctcttcaccaactagt
cagccttctggtacccaaaatttccaaggccacagccttttgagagtctcatctgtaggt
tcccctgcctcctcagcaccaaatatgcagtcccttaatcaaccatggttgtcatctgga
gcacaaggaaaacctcctctgccaccaccatcacttaggctgcagatgaactcaccatca
atccagccaaggtcacatactcctcagcaacatcattccttgcccccagcttcacaggca
caacaacagcacatgtcatctgcacagccgcaacaaaatcttccttcgcatcagcctcaa
gaacattttgggcaacaattaccgtcaagaaccccacaaacttcgccacttcaacaacag
gttatgagagtacaaggttctgccagtcaaaagccttcatctcttgccatttctcagcct
aacccactccagccagcagcgctaagtaaatcagctattgcagagagtaatgattctggt
ggtcgcattctcagcaaaagaagcattcatgagctagttagccagattgatccatcagag
aagttggatgcagaagttgaagacattcttgtggatattgcggaagattttgtggattct
attactacatttggttgctcattagccaagcatcggaaatcagatacactagaggcaaag
gacatacttttacatcttgaaagaaactggaatatgtcgcttcctggctttggtggtgat
gaaattaagacatacagaaaaccacatgtaactgacattcacaaggagagacttgcagtg
ataaagaagtcgattattgcagcagaggttaccaatactaagaactttgttggacaaggt
gttacaaatgtaaagggtaacctggcaaaggcacctgtaaatattattggctccccaaac
tttaaagcacgtgaagttacataa
DBGET
integrated database retrieval system
